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Magnesium in PDB 3jay: Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus (pdb code 3jay). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus, PDB code: 3jay:

Magnesium binding site 1 out of 1 in 3jay

Go back to Magnesium Binding Sites List in 3jay
Magnesium binding site 1 out of 1 in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1105

b:0.6
occ:1.00
O2B A:GTP1104 2.0 0.1 1.0
O2G A:GTP1104 2.2 0.9 1.0
PG A:GTP1104 2.4 0.2 1.0
O3G A:GTP1104 2.5 1.0 1.0
O3B A:GTP1104 2.5 0.5 1.0
PB A:GTP1104 2.7 0.0 1.0
O2A A:GTP1104 3.3 0.4 1.0
OD2 A:ASP254 3.6 0.3 1.0
O3A A:GTP1104 3.7 0.6 1.0
O1G A:GTP1104 3.9 0.2 1.0
O1B A:GTP1104 3.9 0.2 1.0
PA A:GTP1104 4.0 0.1 1.0
NH2 A:ARG255 4.1 0.2 1.0
OE2 A:GLU237 4.5 0.3 1.0
OE1 A:GLN258 4.6 0.7 1.0
CE1 A:HIS212 4.7 0.1 1.0
O1A A:GTP1104 4.7 0.3 1.0
CG A:ASP254 4.8 0.3 1.0
OH A:TYR59 4.9 0.8 1.0

Reference:

X.Yu, J.Jiang, J.Sun, Z.H.Zhou. A Putative Atpase Mediates Rna Transcription and Capping in A Dsrna Virus. Elife V. 4 07901 2015.
ISSN: ESSN 2050-084X
PubMed: 26240998
DOI: 10.7554/ELIFE.07901
Page generated: Mon Dec 14 08:19:46 2020

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