Atomistry » Magnesium » PDB 3jay-3jwr » 3jay
Atomistry »
  Magnesium »
    PDB 3jay-3jwr »
      3jay »

Magnesium in PDB 3jay: Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus (pdb code 3jay). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus, PDB code: 3jay:

Magnesium binding site 1 out of 1 in 3jay

Go back to Magnesium Binding Sites List in 3jay
Magnesium binding site 1 out of 1 in the Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atomic Model of Transcribing Cytoplasmic Polyhedrosis Virus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1105

b:0.6
occ:1.00
O2B A:GTP1104 2.0 0.1 1.0
O2G A:GTP1104 2.2 0.9 1.0
PG A:GTP1104 2.4 0.2 1.0
O3G A:GTP1104 2.5 1.0 1.0
O3B A:GTP1104 2.5 0.5 1.0
PB A:GTP1104 2.7 0.0 1.0
O2A A:GTP1104 3.3 0.4 1.0
OD2 A:ASP254 3.6 0.3 1.0
O3A A:GTP1104 3.7 0.6 1.0
O1G A:GTP1104 3.9 0.2 1.0
O1B A:GTP1104 3.9 0.2 1.0
PA A:GTP1104 4.0 0.1 1.0
NH2 A:ARG255 4.1 0.2 1.0
OE2 A:GLU237 4.5 0.3 1.0
OE1 A:GLN258 4.6 0.7 1.0
CE1 A:HIS212 4.7 0.1 1.0
O1A A:GTP1104 4.7 0.3 1.0
CG A:ASP254 4.8 0.3 1.0
OH A:TYR59 4.9 0.8 1.0

Reference:

X.Yu, J.Jiang, J.Sun, Z.H.Zhou. A Putative Atpase Mediates Rna Transcription and Capping in A Dsrna Virus. Elife V. 4 07901 2015.
ISSN: ESSN 2050-084X
PubMed: 26240998
DOI: 10.7554/ELIFE.07901
Page generated: Wed Aug 14 17:08:28 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy