Magnesium in PDB 3jsz: Legionella Pneumophila Glucosyltransferase LGT1 N293A with Udp-Glc

The structure of Legionella Pneumophila Glucosyltransferase LGT1 N293A with Udp-Glc, PDB code: 3jsz was solved by W.Lu, J.Du, Y.Belyi, M.Stahl, T.Zivilikidis, S.Gerhardt, K.Aktories, O.Einsle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	21.96 / 1.70
Space group	H 3
Cell size a, b, c (Å), α, β, γ (°)	122.232, 122.232, 102.779, 90.00, 90.00, 120.00
R / Rfree (%)	16.6 / 19.3

The binding sites of Magnesium atom in the Legionella Pneumophila Glucosyltransferase LGT1 N293A with Udp-Glc (pdb code 3jsz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Legionella Pneumophila Glucosyltransferase LGT1 N293A with Udp-Glc, PDB code: 3jsz:

Magnesium binding site 1 out of 1 in the Legionella Pneumophila Glucosyltransferase LGT1 N293A with Udp-Glc


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Legionella Pneumophila Glucosyltransferase LGT1 N293A with Udp-Glc within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg527 b:30.9 occ:1.00 O A:HOH936 2.1 44.6 1.0 O A:HOH1069 2.2 26.4 1.0 O2B A:UPG526 2.3 23.4 1.0 O A:HOH552 2.4 40.5 1.0 O1A A:UPG526 2.4 20.3 1.0 PB A:UPG526 3.4 22.6 1.0 PA A:UPG526 3.6 19.5 1.0 O3A A:UPG526 3.8 20.5 1.0 O3B A:UPG526 3.9 20.3 1.0 O A:HOH553 4.0 48.6 1.0 OD2 A:ASP246 4.1 18.0 1.0 O A:HOH736 4.2 19.4 1.0 OD1 A:ASP248 4.2 26.2 1.0 O2' A:UPG526 4.3 22.0 1.0 O2A A:UPG526 4.3 20.1 1.0 OD2 A:ASP248 4.4 26.4 1.0 O A:HOH935 4.4 48.4 1.0 O A:HOH646 4.5 42.5 1.0 O1B A:UPG526 4.8 22.4 1.0 CG A:ASP248 4.8 24.4 1.0 OD1 A:ASN499 4.8 29.5 1.0 O A:HOH937 4.9 44.5 1.0 C1' A:UPG526 4.9 18.8 1.0 O5C A:UPG526 4.9 18.0 1.0 O A:HOH871 5.0 31.8 1.0

W.Lu, J.Du, M.Stahl, T.Tzivelekidis, Y.Belyi, S.Gerhardt, K.Aktories, O.Einsle. Structural Basis of the Action of Glucosyltransferase LGT1 From Legionella Pneumophila. J.Mol.Biol. 2009.
ISSN: ESSN 1089-8638
PubMed: 19941871
DOI: 10.1016/J.JMB.2009.11.044