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Magnesium in PDB 3jwg: Crystal Structure Analysis of the Methyltransferase Domain of Bacterial-CTHEN1-C

Protein crystallography data

The structure of Crystal Structure Analysis of the Methyltransferase Domain of Bacterial-CTHEN1-C, PDB code: 3jwg was solved by R.H.Huang, C.M.Chan, C.Zhou, J.S.Brunzelle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 83.995, 83.995, 61.995, 90.00, 90.00, 120.00
R / Rfree (%) 21.8 / 23.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure Analysis of the Methyltransferase Domain of Bacterial-CTHEN1-C (pdb code 3jwg). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure Analysis of the Methyltransferase Domain of Bacterial-CTHEN1-C, PDB code: 3jwg:

Magnesium binding site 1 out of 1 in 3jwg

Go back to Magnesium Binding Sites List in 3jwg
Magnesium binding site 1 out of 1 in the Crystal Structure Analysis of the Methyltransferase Domain of Bacterial-CTHEN1-C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure Analysis of the Methyltransferase Domain of Bacterial-CTHEN1-C within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg220

b:24.2
occ:1.00
O A:GLY37 2.3 17.0 1.0
O A:ILE109 2.3 19.7 1.0
O A:HOH327 2.4 15.0 1.0
O A:HOH269 2.5 36.5 1.0
O A:HOH329 2.5 17.8 1.0
C A:ILE109 3.3 19.1 1.0
C A:GLY37 3.3 19.1 1.0
CB A:ILE109 3.5 19.6 1.0
CA A:ILE109 3.7 19.0 1.0
N A:ILE109 3.8 16.2 1.0
N A:CYS38 4.1 17.4 1.0
CA A:CYS38 4.2 18.8 1.0
O A:HOH250 4.2 33.8 1.0
CA A:GLY37 4.3 18.4 1.0
OD1 A:ASP35 4.3 20.2 1.0
O A:LEU36 4.3 15.8 1.0
C A:CYS38 4.3 18.8 1.0
OD2 A:ASP35 4.4 21.5 1.0
CG2 A:ILE109 4.4 22.3 1.0
CG2 A:VAL111 4.4 17.8 1.0
N A:GLU110 4.5 20.6 1.0
CG1 A:ILE109 4.6 20.0 1.0
O A:CYS38 4.6 19.4 1.0
CG A:ASP35 4.7 17.4 1.0
CB A:GLU110 4.8 28.2 1.0
N A:GLY39 4.8 22.4 1.0
O A:GLU110 4.9 23.8 1.0
C A:GLU110 4.9 22.2 1.0
CA A:GLU110 5.0 23.5 1.0

Reference:

C.Mui Chan, C.Zhou, J.S.Brunzelle, R.H.Huang. Structural and Biochemical Insights Into 2'-O-Methylation at the 3'-Terminal Nucleotide of Rna By HEN1. Proc.Natl.Acad.Sci.Usa V. 106 17699 2009.
ISSN: ISSN 0027-8424
PubMed: 19822745
DOI: 10.1073/PNAS.0907540106
Page generated: Mon Dec 14 08:20:43 2020

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