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Magnesium in PDB 3k2g: Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides

Protein crystallography data

The structure of Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides, PDB code: 3k2g was solved by D.Kumaran, S.K.Burley, S.Swaminathan, New York Sgx Researchcenter For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.79 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 179.735, 47.414, 188.934, 90.00, 108.34, 90.00
R / Rfree (%) 20.4 / 22.5

Other elements in 3k2g:

The structure of Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides also contains other interesting chemical elements:

Zinc (Zn) 8 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides (pdb code 3k2g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides, PDB code: 3k2g:

Magnesium binding site 1 out of 1 in 3k2g

Go back to Magnesium Binding Sites List in 3k2g
Magnesium binding site 1 out of 1 in the Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg500

b:28.0
occ:1.00
O A:HOH366 1.9 24.8 1.0
O A:HOH363 2.0 22.9 1.0
O A:HOH369 2.0 31.3 1.0
O A:HOH371 2.1 28.8 1.0
O A:HOH370 2.1 22.4 1.0
O A:HOH367 2.2 19.9 1.0
OD1 A:ASP153 3.9 17.4 1.0
OD2 A:ASP153 4.0 19.2 1.0
CG A:ASP153 4.3 20.5 1.0
O A:HOH573 4.4 28.5 1.0
O A:HOH574 4.5 32.0 1.0
NH2 A:ARG199 4.7 12.5 1.0
O A:HOH499 4.7 25.2 1.0

Reference:

D.Kumaran, S.K.Burley, S.Swaminathan. Crystal Structure of A Resiniferatoxin-Binding Protein From Rhodobacter Sphaeroides To Be Published.
Page generated: Mon Dec 14 08:21:19 2020

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