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Magnesium in PDB 3k6q: Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution

Protein crystallography data

The structure of Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution, PDB code: 3k6q was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.83 / 1.80
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 41.974, 56.943, 62.561, 107.00, 103.03, 100.21
R / Rfree (%) 19.3 / 24.9

Other elements in 3k6q:

The structure of Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution (pdb code 3k6q). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution, PDB code: 3k6q:

Magnesium binding site 1 out of 1 in 3k6q

Go back to Magnesium Binding Sites List in 3k6q
Magnesium binding site 1 out of 1 in the Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Antitoxin Part of A Putative Toxin/Antitoxin System (SWOL_0700) From Syntrophomonas Wolfei Subsp. Wolfei at 1.80 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg139

b:44.3
occ:1.00
O B:HOH145 1.9 32.5 1.0
O B:HOH141 2.0 15.4 1.0
O B:HOH146 2.0 16.8 1.0
O B:HOH140 2.1 23.5 1.0
O B:HOH142 2.2 14.3 1.0
OE2 B:GLU92 3.9 14.4 0.5
OD2 B:ASP96 4.3 17.5 1.0
OD1 B:ASP96 4.4 14.3 1.0
OE2 B:GLU92 4.7 13.9 0.5
CD B:GLU92 4.8 14.4 0.5
CG B:GLU92 4.8 14.8 0.5
CG B:ASP96 4.8 16.1 1.0
CD B:GLU92 4.9 16.1 0.5

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Mon Dec 14 08:21:32 2020

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