Magnesium in PDB 3kws: Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution

The structure of Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution, PDB code: 3kws was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.37 / 1.68
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	51.573, 107.200, 113.146, 90.00, 90.00, 90.00
R / Rfree (%)	15 / 18.2

The binding sites of Magnesium atom in the Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution (pdb code 3kws). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution, PDB code: 3kws:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg401 b:8.1 occ:1.00 OE2 A:GLU287 2.0 10.1 0.5 OE2 A:GLU190 2.0 7.4 1.0 OD2 A:ASP223 2.1 5.0 1.0 OE1 A:GLU287 2.2 2.3 0.5 O A:HOH416 2.2 8.3 1.0 ND1 A:HIS249 2.2 5.5 1.0 O A:HOH587 2.2 11.5 1.0 CE1 A:HIS249 3.0 7.4 1.0 CD A:GLU190 3.0 8.5 1.0 CD A:GLU287 3.1 10.3 0.5 CD A:GLU287 3.1 5.9 0.5 CG A:ASP223 3.2 5.9 1.0 CG A:HIS249 3.3 4.1 1.0 OE1 A:GLU190 3.4 9.7 1.0 OE2 A:GLU287 3.5 5.3 0.5 OE1 A:GLU287 3.5 11.4 0.5 CB A:ASP223 3.7 5.7 1.0 CB A:HIS249 3.8 5.3 1.0 O A:HOH747 4.2 33.4 1.0 NE2 A:HIS249 4.2 5.5 1.0 OD1 A:ASP223 4.2 6.5 1.0 NH2 A:ARG256 4.3 14.3 1.0 CD2 A:HIS226 4.3 6.0 1.0 CG A:GLU190 4.4 6.5 1.0 O A:HOH439 4.4 10.2 1.0 CG A:GLU287 4.4 8.2 0.5 CD2 A:HIS249 4.4 5.9 1.0 CG A:GLU287 4.4 6.1 0.5 NE2 A:HIS226 4.4 6.3 1.0 CE A:MSE221 4.5 5.7 1.0 CB A:GLU287 4.6 7.8 0.5 CB A:GLU287 4.6 7.2 0.5

Magnesium binding site 2 out of 2 in the Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Putative Sugar Isomerase (YP_001305149.1) From Parabacteroides Distasonis Atcc 8503 at 1.68 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:6.0 occ:1.00 OE2 B:GLU190 2.0 5.7 1.0 OD2 B:ASP223 2.0 5.2 1.0 OE1 B:GLU287 2.0 8.0 0.5 OE1 B:GLU287 2.1 3.0 0.5 O B:HOH507 2.2 9.4 1.0 O B:HOH768 2.2 7.1 1.0 ND1 B:HIS249 2.3 4.8 1.0 CD B:GLU190 3.0 6.9 1.0 CE1 B:HIS249 3.1 5.6 1.0 CD B:GLU287 3.1 8.5 0.5 CD B:GLU287 3.1 5.6 0.5 CG B:ASP223 3.2 6.0 1.0 CG B:HIS249 3.4 3.6 1.0 OE1 B:GLU190 3.4 7.6 1.0 OE2 B:GLU287 3.5 9.5 0.5 OE2 B:GLU287 3.5 3.2 0.5 CB B:ASP223 3.8 6.4 1.0 CB B:HIS249 3.8 4.7 1.0 O B:HOH595 4.2 31.2 1.0 OD1 B:ASP223 4.2 7.5 1.0 NE2 B:HIS249 4.2 6.3 1.0 NH2 B:ARG256 4.3 11.6 1.0 CG B:GLU287 4.3 5.3 0.5 O B:HOH482 4.3 10.2 1.0 CG B:GLU287 4.4 6.9 0.5 CG B:GLU190 4.4 5.5 1.0 CD2 B:HIS226 4.4 6.1 1.0 CD2 B:HIS249 4.4 4.1 1.0 O B:HOH721 4.4 31.9 1.0 CE B:MSE221 4.4 7.0 1.0 NE2 B:HIS226 4.5 4.8 1.0 CB B:GLU287 4.6 5.7 0.5 CB B:GLU287 4.6 6.1 0.5

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.