Magnesium in PDB 3llu: Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp- Binding Protein C

The structure of Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp- Binding Protein C, PDB code: 3llu was solved by L.Nedyalkova, W.Tempel, Y.Tong, L.Crombet, N.Zhong, X.Guan, C.H.Arrowsmith, A.M.Edwards, C.Bountra, J.Weigelt, A.Bochkarev, H.Park, Structuralgenomics Consortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	22.84 / 1.40
Space group	I 4
Cell size a, b, c (Å), α, β, γ (°)	72.220, 72.220, 72.182, 90.00, 90.00, 90.00
R / Rfree (%)	15.4 / 18.1

The binding sites of Magnesium atom in the Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp- Binding Protein C (pdb code 3llu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp- Binding Protein C, PDB code: 3llu:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp- Binding Protein C


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp- Binding Protein C within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:10.2 occ:1.00 O1B A:GNP501 2.0 9.5 1.0 O2G A:GNP501 2.0 11.2 1.0 O A:HOH243 2.0 10.9 1.0 OG A:SER75 2.1 10.0 1.0 OG1 A:THR96 2.1 12.0 1.0 O A:HOH41 2.1 11.0 1.0 CB A:THR96 3.1 12.2 1.0 CB A:SER75 3.1 10.5 1.0 PG A:GNP501 3.2 10.7 1.0 PB A:GNP501 3.3 9.7 1.0 N3B A:GNP501 3.5 10.1 1.0 N A:THR96 3.8 12.4 1.0 N A:SER75 3.9 8.9 1.0 O1G A:GNP501 4.0 10.9 1.0 CA A:SER75 4.1 9.4 1.0 CA A:THR96 4.1 12.7 1.0 CG2 A:THR96 4.2 13.9 1.0 OD2 A:ASP116 4.2 11.4 1.0 O2A A:GNP501 4.2 12.1 1.0 OD1 A:ASP116 4.2 12.2 1.0 O2B A:GNP501 4.3 9.9 1.0 O3A A:GNP501 4.3 9.5 1.0 UNK A:UNX5 4.3 30.0 0.0 O3G A:GNP501 4.4 12.1 1.0 O A:GLU94 4.5 13.2 1.0 PA A:GNP501 4.6 10.6 1.0 CG A:ASP116 4.6 12.2 1.0 O A:PHE117 4.6 11.9 1.0 O1A A:GNP501 4.7 11.5 1.0 C A:SER95 4.8 13.9 1.0 CB A:LYS74 4.8 9.9 1.0 CE A:LYS74 4.8 11.7 1.0 O A:HOH253 5.0 20.1 1.0 C A:LYS74 5.0 9.2 1.0 CA A:SER95 5.0 14.3 1.0

L.Nedyalkova, W.Tempel, Y.Tong, L.Crombet, N.Zhong, X.Guan, C.H.Arrowsmith, A.M.Edwards, C.Bountra, J.Weigelt, A.Bochkarev, H.Park. Crystal Structure of the Nucleotide-Binding Domain of Ras-Related Gtp-Binding Protein C To Be Published.