Magnesium in PDB 3lop: Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum

The structure of Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum, PDB code: 3lop was solved by K.Palani, S.K.Burley, S.Swaminathan, New York Sgx Researchcenter For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.72 / 1.55
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	44.110, 64.739, 114.085, 90.00, 90.00, 90.00
R / Rfree (%)	17.9 / 19.5

The structure of Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum also contains other interesting chemical elements:

Nickel	(Ni)	2 atoms
Manganese	(Mn)	1 atom

The binding sites of Magnesium atom in the Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum (pdb code 3lop). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum, PDB code: 3lop:

Magnesium binding site 1 out of 1 in the Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg408 b:16.8 occ:1.00 OH A:TYR155 2.8 5.8 1.0 O A:ALA136 2.9 8.3 1.0 NZ A:LYS152 2.9 10.8 1.0 OXT A:LEU400 3.5 8.3 1.0 CZ A:TYR155 3.6 4.8 1.0 CE A:LYS152 3.6 8.4 1.0 CE1 A:TYR155 3.6 3.8 1.0 CA A:THR137 3.6 5.9 1.0 CA A:SER260 3.7 6.4 1.0 C A:ALA136 3.7 5.8 1.0 CB A:SER260 3.8 6.9 1.0 NH2 A:ARG315 3.8 6.3 1.0 N A:SER260 3.9 4.8 1.0 N A:THR137 4.0 6.4 1.0 OG A:SER259 4.0 7.0 1.0 N A:GLY138 4.1 4.5 1.0 O A:HOH510 4.1 13.6 1.0 C A:SER259 4.2 6.8 1.0 N A:LEU400 4.2 4.8 1.0 C A:LEU400 4.3 7.2 1.0 C A:THR137 4.3 6.9 1.0 O A:SER259 4.3 7.0 1.0 CB A:LEU400 4.4 3.6 1.0 CZ A:ARG315 4.5 5.7 1.0 CA A:LEU400 4.5 7.1 1.0 NH1 A:ARG315 4.6 5.7 1.0 CB A:THR137 4.7 8.2 1.0 CD1 A:LEU400 4.8 1.0 1.0 CE2 A:TYR155 4.9 3.7 1.0 CA A:ALA136 4.9 5.4 1.0 OG A:SER260 4.9 7.3 1.0 CD1 A:TYR155 4.9 4.5 1.0 O A:HOH10 4.9 8.0 1.0 CD A:LYS152 5.0 7.8 1.0

K.Palani, S.K.Burley, S.Swaminathan. Crystal Structure of Substrate-Binding Periplasmic Protein (Pbp) From Ralstonia Solanacearum To Be Published.