Magnesium in PDB 3lsn: Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium

The structure of Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium, PDB code: 3lsn was solved by V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo, New York Sgxresearch Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.35
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	84.182, 47.875, 75.982, 90.00, 120.78, 90.00
R / Rfree (%)	17.9 / 20.1

The binding sites of Magnesium atom in the Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium (pdb code 3lsn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium, PDB code: 3lsn:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg500 b:13.2 occ:0.50 O A:HOH529 2.0 15.3 1.0 O A:HOH522 2.0 14.2 1.0 OE2 A:GLU136 2.1 20.2 1.0 CD A:GLU136 3.1 27.5 1.0 OE1 A:GLU136 3.5 22.1 1.0 O A:HOH388 4.0 19.8 1.0 CG A:GLU136 4.4 21.4 1.0

Magnesium binding site 2 out of 3 in the Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:20.2 occ:1.00 OD1 A:ASP224 2.0 17.8 1.0 O A:HOH382 2.0 23.8 1.0 O A:HOH547 2.0 21.2 1.0 O A:HOH433 2.1 19.9 1.0 O A:HOH380 2.1 18.3 1.0 O A:HOH525 2.1 24.1 1.0 CG A:ASP224 3.0 16.5 1.0 OD2 A:ASP224 3.3 18.3 1.0 O A:HOH356 4.1 22.5 1.0 O A:HOH330 4.2 34.1 1.0 O A:HOH378 4.3 28.8 1.0 O A:GLN220 4.4 14.7 1.0 OE1 A:GLN220 4.4 20.1 1.0 CB A:ASP224 4.4 17.7 1.0 CE1 A:HIS178 4.5 15.2 1.0 NE2 A:HIS178 4.6 16.4 1.0 CA A:ASP224 4.7 17.5 1.0 N A:ASP224 4.7 17.7 1.0

Magnesium binding site 3 out of 3 in the Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:24.1 occ:1.00 O A:HOH322 2.0 32.3 1.0 O A:HOH321 2.0 22.3 1.0 OD2 A:ASP92 2.1 23.8 1.0 O A:HOH549 2.1 23.1 1.0 OD1 A:ASP90 2.3 25.6 1.0 O A:HOH561 2.4 31.6 1.0 CG A:ASP90 3.2 41.2 1.0 CG A:ASP92 3.3 31.5 1.0 CB A:ASP90 3.7 23.2 1.0 O A:HOH422 3.9 20.9 1.0 OD1 A:ASP92 4.0 24.1 1.0 OD2 A:ASP84 4.0 18.8 1.0 OD1 A:ASP85 4.1 14.2 1.0 O A:HOH559 4.2 31.6 1.0 OD2 A:ASP90 4.2 26.6 1.0 NH1 A:ARG95 4.3 21.3 1.0 CB A:ASP92 4.3 20.9 1.0 O A:HOH560 4.4 44.9 1.0 O A:HOH488 4.5 47.7 1.0

V.N.Malashkevich, R.Toro, J.M.Sauder, S.K.Burley, S.C.Almo. Crystal Structure of Putative Geranyltranstransferase From Pseudomonas Fluorescens Pf-5 Complexed with Magnesium To Be Published.