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Magnesium in PDB 3lu0: Molecular Model of Escherichia Coli Core Rna Polymerase

Enzymatic activity of Molecular Model of Escherichia Coli Core Rna Polymerase

All present enzymatic activity of Molecular Model of Escherichia Coli Core Rna Polymerase:
2.7.7.6;

Other elements in 3lu0:

The structure of Molecular Model of Escherichia Coli Core Rna Polymerase also contains other interesting chemical elements:

Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Molecular Model of Escherichia Coli Core Rna Polymerase (pdb code 3lu0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Molecular Model of Escherichia Coli Core Rna Polymerase, PDB code: 3lu0:

Magnesium binding site 1 out of 1 in 3lu0

Go back to Magnesium Binding Sites List in 3lu0
Magnesium binding site 1 out of 1 in the Molecular Model of Escherichia Coli Core Rna Polymerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Molecular Model of Escherichia Coli Core Rna Polymerase within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg1408

b:25.0
occ:1.00
OD1 D:ASP460 1.0 0.0 1.0
CG D:ASP460 2.2 0.0 1.0
OD1 D:ASP462 2.4 0.0 1.0
OD2 D:ASP464 2.6 0.0 1.0
OD2 D:ASP460 2.8 0.0 1.0
CG D:ASP462 2.9 0.0 1.0
CG D:ASP464 3.1 0.0 1.0
OD2 D:ASP462 3.1 0.0 1.0
OD1 D:ASP464 3.2 0.0 1.0
N D:ASP460 3.4 0.0 1.0
CB D:ASP460 3.4 0.0 1.0
CA D:ASP460 3.6 0.0 1.0
C D:ASP460 3.7 0.0 1.0
O D:ASP460 3.9 0.0 1.0
N D:ASP462 4.0 0.0 1.0
CB D:ASP462 4.1 0.0 1.0
N D:PHE461 4.2 0.0 1.0
CB D:ASP464 4.3 0.0 1.0
C D:ALA459 4.5 0.0 1.0
CA D:ASP462 4.6 0.0 1.0
N D:ASP464 4.7 0.0 1.0
N D:GLY463 4.8 0.0 1.0
CA D:ALA459 4.9 0.0 1.0
CA D:PHE461 4.9 0.0 1.0
C D:PHE461 4.9 0.0 1.0
CB D:ALA459 5.0 0.0 1.0

Reference:

N.Opalka, J.Brown, W.J.Lane, K.A.Twist, R.Landick, F.J.Asturias, S.A.Darst. Complete Structural Model of Escherichia Coli Rna Polymerase From A Hybrid Approach. Plos Biol. V. 8 00483 2010.
ISSN: ISSN 1544-9173
PubMed: 20856905
DOI: 10.1371/JOURNAL.PBIO.1000483
Page generated: Mon Dec 14 08:24:44 2020

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