Magnesium in PDB 3mkh: Podospora Anserina Nitroalkane Oxidase

All present enzymatic activity of Podospora Anserina Nitroalkane Oxidase:
1.7.3.1;

The structure of Podospora Anserina Nitroalkane Oxidase, PDB code: 3mkh was solved by J.R.Tormos, A.B.Taylor, S.C.Daubner, P.J.Hart, P.F.Fitzpatrick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.88 / 2.00
Space group	P 43
Cell size a, b, c (Å), α, β, γ (°)	137.501, 137.501, 131.323, 90.00, 90.00, 90.00
R / Rfree (%)	17.6 / 20.9

The binding sites of Magnesium atom in the Podospora Anserina Nitroalkane Oxidase (pdb code 3mkh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Podospora Anserina Nitroalkane Oxidase, PDB code: 3mkh:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Podospora Anserina Nitroalkane Oxidase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Podospora Anserina Nitroalkane Oxidase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg439 b:44.5 occ:1.00 O B:HOH1284 2.2 35.9 1.0 O B:HOH925 2.3 32.5 1.0 O A:HOH900 2.3 30.1 1.0 O B:HOH1283 2.3 38.6 1.0 O B:HOH932 2.4 38.3 1.0 O B:HOH1001 2.4 39.5 1.0 O B:HOH762 4.1 39.5 1.0 O A:HOH1011 4.1 37.9 1.0 ND2 B:ASN300 4.3 28.8 1.0 O A:HOH1099 4.3 35.3 1.0 O A:GLY138 4.4 27.4 1.0 CA A:GLY138 4.4 24.3 1.0 O B:HOH470 4.4 35.4 1.0 N B:GLY302 4.6 31.3 1.0 OD1 B:ASP299 4.6 29.4 1.0 O B:HOH607 4.8 49.5 1.0 C A:GLY138 4.9 27.5 1.0

Magnesium binding site 2 out of 2 in the Podospora Anserina Nitroalkane Oxidase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Podospora Anserina Nitroalkane Oxidase within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg439 b:53.8 occ:1.00 O C:HOH977 2.4 47.1 1.0 O D:HOH1431 2.5 50.0 1.0 O D:HOH1015 2.5 41.4 1.0 O D:HOH973 2.6 46.3 1.0 O D:HOH1139 2.6 54.8 1.0 O D:HOH1136 2.6 47.3 1.0 O C:HOH823 4.0 43.5 1.0 O D:HOH1073 4.3 47.0 1.0 O D:HOH1143 4.4 50.2 1.0 CA C:GLY138 4.4 36.4 1.0 ND2 D:ASN300 4.4 33.0 1.0 O C:GLY138 4.4 34.8 1.0 O D:HOH682 4.5 41.2 1.0 N D:GLY302 4.6 38.0 1.0 OD1 D:ASP299 4.7 36.6 1.0 O D:HOH768 4.8 51.6 1.0 C C:GLY138 4.9 37.0 1.0

J.R.Tormos, A.B.Taylor, S.C.Daubner, P.J.Hart, P.F.Fitzpatrick. Identification of A Hypothetical Protein From Podospora Anserina As A Nitroalkane Oxidase. Biochemistry V. 49 5035 2010.
ISSN: ISSN 0006-2960
PubMed: 20481475
DOI: 10.1021/BI100610E