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Magnesium in PDB 3mwc: Crystal Structure of Probable O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia

Protein crystallography data

The structure of Crystal Structure of Probable O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia, PDB code: 3mwc was solved by Y.Patskovsky, R.Toro, M.Dickey, J.M.Sauder, J.Gerlt, S.C.Almo, S.K.Burley, New York Sgx Research Center For Structural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.00 / 1.80
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 138.171, 53.233, 59.386, 90.00, 113.40, 90.00
R / Rfree (%) 20.9 / 26.2

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Probable O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia (pdb code 3mwc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Probable O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia, PDB code: 3mwc:

Magnesium binding site 1 out of 1 in 3mwc

Go back to Magnesium Binding Sites List in 3mwc
Magnesium binding site 1 out of 1 in the Crystal Structure of Probable O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Probable O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg400

b:56.8
occ:1.00
OE2 A:GLU235 2.0 35.1 1.0
OD2 A:ASP260 2.1 33.4 1.0
O A:HOH558 2.1 44.0 1.0
O A:HOH462 2.2 41.7 1.0
CD A:GLU235 3.0 31.5 1.0
OD2 A:ASP210 3.0 55.2 1.0
CG A:ASP260 3.2 40.4 1.0
NZ A:LYS284 3.6 55.1 1.0
CB A:ASP260 3.7 32.2 1.0
OE1 A:GLU235 3.8 31.2 1.0
CG A:ASP210 3.9 45.4 1.0
CG A:GLU235 3.9 33.6 1.0
NZ A:LYS182 4.0 39.6 1.0
OD1 A:ASP210 4.0 49.8 1.0
OE2 A:GLU261 4.1 49.0 1.0
CE A:LYS284 4.2 49.0 1.0
OD1 A:ASP260 4.3 36.8 1.0
OE1 A:GLU261 4.3 39.6 1.0
CD A:GLU261 4.6 51.6 1.0
ND2 A:ASN212 4.9 43.1 1.0

Reference:

Y.Patskovsky, R.Toro, M.Dickey, J.M.Sauder, J.Gerlt, S.K.Burley, S.C.Almo. Crystal Structure of O-Succinylbenzoic Acid Synthetase From Kosmotoga Olearia To Be Published.
Page generated: Mon Dec 14 08:27:11 2020

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