Magnesium in PDB 3mz0: Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis

Enzymatic activity of Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis

All present enzymatic activity of Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis:
1.1.1.18;

Protein crystallography data

The structure of Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis, PDB code: 3mz0 was solved by K.E.Van Straaten, D.R.J.Palmer, D.A.R.Sanders, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

*Resolution Low / High (Å)*	19.70 / 1.54
*Space group*	I 2 2 2
*Cell size a, b, c (Å), α, β, γ (°)*	52.207, 120.054, 129.254, 90.00, 90.00, 90.00
*R / R_free (%)*	17.5 / 19.4

Other elements in 3mz0:

The structure of Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis also contains other interesting chemical elements:

Chlorine

(Cl)

4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis (pdb code 3mz0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis, PDB code: 3mz0:

Magnesium binding site 1 out of 1 in 3mz0

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Magnesium Binding Sites List in 3mz0

Magnesium binding site 1 out of 1 in the Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis

Mono view

Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Apo Myo-Inositol Dehydrogenase From Bacillus Subtilis within 5.0Å range:

probe	atom	residue	distance (Å)	B	Occ
A:Mg349 b:24.9 occ:1.00	O	A:HOH524	2.1	33.1	1.0
	O	A:HOH483	2.2	30.3	1.0
	O	A:HOH446	2.2	23.8	1.0
	O	A:HOH649	2.2	29.9	1.0
	OD1	A:ASP267	2.2	21.1	1.0
	O	A:HOH496	2.2	38.6	1.0
	CG	A:ASP267	3.1	22.0	1.0
	OD2	A:ASP267	3.4	27.3	1.0
	O	A:HOH675	4.1	42.2	1.0
	O	A:ILE268	4.2	14.2	1.0
	CB	A:ASP267	4.5	13.8	1.0
	CA	A:ASP267	5.0	13.8	1.0

Reference:

K.E.Van Straaten, H.Zheng, D.R.Palmer, D.A.Sanders. Structural Investigation of Myo-Inositol Dehydrogenase From Bacillus Subtilis: Implications For Catalytic Mechanism and Inositol Dehydrogenase Subfamily Classification. Biochem.J. V. 432 237 2010.
ISSN: ISSN 0264-6021
PubMed: 20809899
DOI: 10.1042/BJ20101079

Page generated: Wed Aug 14 19:32:24 2024

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