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Magnesium in PDB 3n1g: Crystal Structure of Dhhn Bound to BOCFN3

Protein crystallography data

The structure of Crystal Structure of Dhhn Bound to BOCFN3, PDB code: 3n1g was solved by J.M.Kavran, D.J.Leahy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 24.65 / 1.90
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 87.210, 92.985, 74.684, 90.00, 90.00, 90.00
R / Rfree (%) 18.2 / 22.2

Other elements in 3n1g:

The structure of Crystal Structure of Dhhn Bound to BOCFN3 also contains other interesting chemical elements:

Calcium (Ca) 4 atoms
Zinc (Zn) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Dhhn Bound to BOCFN3 (pdb code 3n1g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Dhhn Bound to BOCFN3, PDB code: 3n1g:

Magnesium binding site 1 out of 1 in 3n1g

Go back to Magnesium Binding Sites List in 3n1g
Magnesium binding site 1 out of 1 in the Crystal Structure of Dhhn Bound to BOCFN3


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Dhhn Bound to BOCFN3 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg193

b:30.0
occ:1.00
O A:LYS187 2.7 28.1 1.0
OD1 A:ASP189 2.9 28.8 1.0
OG1 A:THR100 2.9 20.0 1.0
N A:ASP189 3.1 38.7 1.0
CB A:THR100 3.2 20.0 1.0
C A:ALA188 3.3 35.0 1.0
CG2 A:THR100 3.5 20.0 1.0
CA A:ALA188 3.5 30.7 1.0
CG2 A:VAL186 3.5 18.7 1.0
CG A:ASP189 3.6 48.7 1.0
CB A:ARG102 3.7 25.0 1.0
C A:LYS187 3.7 31.4 1.0
CG A:ARG145 3.8 27.4 1.0
CA A:ASP189 3.8 37.8 1.0
CD A:ARG145 3.9 36.8 1.0
O A:ALA188 4.0 34.6 1.0
CB A:ASP189 4.0 43.4 1.0
N A:ALA188 4.0 28.8 1.0
O A:HOH219 4.1 33.9 1.0
N A:ARG102 4.4 23.6 1.0
CD A:ARG102 4.5 31.3 1.0
OD2 A:ASP189 4.5 55.1 1.0
CA A:ARG102 4.6 21.5 1.0
N A:CYS103 4.6 19.5 1.0
CB A:VAL186 4.6 18.9 1.0
CG A:ARG102 4.6 25.4 1.0
CA A:THR100 4.7 21.7 1.0
O A:VAL186 4.8 21.0 1.0
CB A:ALA188 4.8 29.3 1.0
C A:VAL186 4.9 19.8 1.0

Reference:

J.M.Kavran, M.D.Ward, O.O.Oladosu, S.Mulepati, D.J.Leahy. All Mammalian Hedgehog Proteins Interact with Cdo and Boc in A Conserved Manner. J.Biol.Chem. 2010.
ISSN: ESSN 1083-351X
PubMed: 20519495
DOI: 10.1074/JBC.M110.131680
Page generated: Mon Dec 14 08:27:27 2020

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