Atomistry » Magnesium » PDB 3nl0-3o0q » 3nz2
Atomistry »
  Magnesium »
    PDB 3nl0-3o0q »
      3nz2 »

Magnesium in PDB 3nz2: Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor

Protein crystallography data

The structure of Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor, PDB code: 3nz2 was solved by Y.Kim, N.Maltseva, J.Hasseman, W.F.Anderson, A.Joachimiak, Center Forstructural Genomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.63 / 2.35
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 77.316, 135.801, 120.535, 90.00, 91.77, 90.00
R / Rfree (%) 18.8 / 25.3

Other elements in 3nz2:

The structure of Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor also contains other interesting chemical elements:

Chlorine (Cl) 5 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor (pdb code 3nz2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor, PDB code: 3nz2:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3nz2

Go back to Magnesium Binding Sites List in 3nz2
Magnesium binding site 1 out of 2 in the Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg197

b:38.7
occ:0.63
MG C:MG197 0.0 38.7 0.6
MG C:MG197 1.2 35.7 0.4
O C:ASN159 2.0 19.4 1.0
OD1 B:ASN159 2.2 26.8 1.0
OG1 C:THR175 2.2 29.9 1.0
O C:HOH199 2.9 22.9 1.0
C C:ASN159 3.2 21.7 1.0
CG B:ASN159 3.3 19.2 1.0
O B:HOH268 3.5 9.6 1.0
CG C:ASN159 3.6 30.6 1.0
CB C:THR175 3.6 29.2 1.0
ND2 C:ASN159 3.6 33.0 1.0
OD1 C:ASN159 3.7 25.4 1.0
CG2 C:VAL161 3.8 5.6 1.0
O B:HOH988 4.0 86.4 1.0
CA C:SER160 4.0 15.5 1.0
N C:SER160 4.0 13.6 1.0
N C:VAL161 4.1 15.8 1.0
C C:SER160 4.1 16.0 1.0
CB B:ASN159 4.1 16.5 1.0
CG2 C:THR175 4.2 10.7 1.0
ND2 B:ASN159 4.2 15.5 1.0
CB C:ASN159 4.2 25.8 1.0
CA C:ASN159 4.2 24.3 1.0
CA C:THR175 4.5 28.7 1.0
N C:THR175 4.5 26.5 1.0
CB C:VAL161 4.5 13.3 1.0
O C:SER160 4.6 28.4 1.0
ND2 A:ASN159 4.7 24.3 1.0
C C:GLY174 4.8 20.2 1.0
O B:ASN159 4.8 19.1 1.0
O C:GLY174 4.9 20.7 1.0
CA C:VAL161 4.9 15.4 1.0
O A:HOH204 5.0 17.6 1.0

Magnesium binding site 2 out of 2 in 3nz2

Go back to Magnesium Binding Sites List in 3nz2
Magnesium binding site 2 out of 2 in the Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg197

b:35.7
occ:0.37
MG C:MG197 0.0 35.7 0.4
MG C:MG197 1.2 38.7 0.6
O C:HOH199 2.3 22.9 1.0
O C:ASN159 2.3 19.4 1.0
O B:HOH268 2.5 9.6 1.0
OG1 C:THR175 2.6 29.9 1.0
OD1 B:ASN159 2.7 26.8 1.0
ND2 C:ASN159 2.9 33.0 1.0
CG C:ASN159 3.2 30.6 1.0
C C:ASN159 3.5 21.7 1.0
O B:HOH988 3.6 86.4 1.0
OD1 C:ASN159 3.7 25.4 1.0
CB C:ASN159 3.9 25.8 1.0
CG B:ASN159 3.9 19.2 1.0
CB C:THR175 3.9 29.2 1.0
ND2 A:ASN159 4.2 24.3 1.0
CA C:ASN159 4.3 24.3 1.0
OG1 A:THR175 4.3 33.4 1.0
N C:SER160 4.4 13.6 1.0
CA C:SER160 4.6 15.5 1.0
CB A:THR175 4.6 34.7 1.0
ND2 B:ASN159 4.6 15.5 1.0
N C:THR175 4.6 26.5 1.0
O A:HOH204 4.7 17.6 1.0
CG2 A:THR175 4.7 32.9 1.0
O A:HOH203 4.7 10.6 1.0
CG2 C:THR175 4.8 10.7 1.0
CA C:THR175 4.9 28.7 1.0
C C:GLY174 5.0 20.2 1.0
CB B:ASN159 5.0 16.5 1.0
C C:SER160 5.0 16.0 1.0

Reference:

Y.Kim, N.Maltseva, J.Hasseman, W.F.Anderson, A.Joachimiak. Crystal Structure of Hexapeptide-Repeat Containing-Acetyltransferase VCA0836 Complexed with Acetyl Co Enzyme A From Vibrio Cholerae O1 Biovar Eltor To Be Published.
Page generated: Mon Dec 14 08:30:55 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy