Magnesium in PDB 3omb: Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis

The structure of Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis, PDB code: 3omb was solved by C.Chang, X.Xu, S.Chin, H.Cui, A.Dong, A.Savchenko, A.Edwards, A.Joachimiak, Midwest Center For Structural Genomics (Mcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.00 / 2.10
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	54.949, 70.099, 122.177, 90.00, 90.00, 90.00
R / Rfree (%)	15.1 / 22.7

The binding sites of Magnesium atom in the Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis (pdb code 3omb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis, PDB code: 3omb:

Magnesium binding site 1 out of 1 in the Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:8.1 occ:1.00 OD1 A:ASP198 2.1 22.6 1.0 OD1 A:ASP206 2.2 24.7 1.0 O A:GLN204 2.3 22.9 1.0 OD1 A:ASN200 2.3 21.0 1.0 OE2 A:GLU207 2.4 21.7 1.0 OD1 A:ASN202 2.4 21.9 1.0 OE1 A:GLU207 2.7 21.9 1.0 CD A:GLU207 2.8 21.3 1.0 CG A:ASN200 3.2 20.2 1.0 CG A:ASP198 3.4 22.6 1.0 CG A:ASP206 3.4 24.7 1.0 C A:GLN204 3.4 23.5 1.0 CG A:ASN202 3.5 21.0 1.0 ND2 A:ASN200 3.5 18.5 1.0 N A:GLN204 3.9 23.4 1.0 OD2 A:ASP206 3.9 27.5 1.0 ND2 A:ASN202 4.0 18.6 1.0 CA A:GLN204 4.1 23.6 1.0 N A:ASP206 4.1 23.7 1.0 N A:ASN202 4.1 20.8 1.0 OD2 A:ASP198 4.2 23.1 1.0 CA A:ASP198 4.3 22.1 1.0 CB A:ASP198 4.3 22.3 1.0 CG A:GLU207 4.3 20.9 1.0 N A:GLY203 4.4 21.4 1.0 CB A:GLN204 4.4 23.8 1.0 N A:ALA205 4.5 23.7 1.0 CB A:ASN200 4.5 20.0 1.0 N A:GLU207 4.5 22.2 1.0 O A:HOH568 4.6 23.6 1.0 CB A:ASP206 4.6 23.5 1.0 C A:ASP198 4.6 21.7 1.0 N A:ASN200 4.6 20.8 1.0 CB A:ASN202 4.6 20.4 1.0 N A:GLY201 4.7 20.9 1.0 CA A:ASN202 4.7 20.5 1.0 C A:GLY203 4.7 23.0 1.0 CA A:ASP206 4.8 23.4 1.0 C A:ASN200 4.8 21.3 1.0 CA A:ALA205 4.8 24.1 1.0 CA A:ASN200 4.8 20.7 1.0 C A:ASN202 4.8 20.9 1.0 O A:ASP198 4.9 22.1 1.0

C.Chang, X.Xu, S.Chin, H.Cui, A.Dong, A.Savchenko, A.Edwards, A.Joachimiak. Crystal Structure of Extracellular Solute-Binding Protein From Bifidobacterium Longum Subsp. Infantis To Be Published.