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Magnesium in PDB 3oru: Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution

Protein crystallography data

The structure of Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution, PDB code: 3oru was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.95 / 1.11
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 61.757, 131.024, 57.902, 90.00, 90.00, 90.00
R / Rfree (%) 12.6 / 14.7

Other elements in 3oru:

The structure of Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution also contains other interesting chemical elements:

Chlorine (Cl) 1 atom
Zinc (Zn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution (pdb code 3oru). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution, PDB code: 3oru:

Magnesium binding site 1 out of 1 in 3oru

Go back to Magnesium Binding Sites List in 3oru
Magnesium binding site 1 out of 1 in the Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A DUF1989 Family Protein (TM1040_0329) From Silicibacter Sp. TM1040 at 1.11 A Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg300

b:22.0
occ:1.00
O A:HOH307 2.0 19.2 1.0
O A:HOH305 2.0 24.4 1.0
O A:HOH304 2.0 27.9 1.0
O A:HOH303 2.0 25.0 1.0
O A:HOH306 2.1 35.8 1.0
O A:HOH302 2.2 24.5 1.0
O A:HOH432 4.1 21.5 1.0
O A:HOH620 4.1 30.4 1.0
OE1 A:GLU217 4.2 13.5 0.5
OE1 A:GLU218 4.2 20.8 1.0
O A:GLY216 4.4 12.8 1.0
OE2 A:GLU217 4.4 18.0 0.5
CD A:GLU217 4.6 13.1 0.5

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Mon Dec 14 08:36:36 2020

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