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Magnesium in PDB 3ova: How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna

Enzymatic activity of How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna

All present enzymatic activity of How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna:
2.7.7.21; 2.7.7.25;

Protein crystallography data

The structure of How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna, PDB code: 3ova was solved by B.C.Pan, Y.Xiong, T.A.Steitz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.00 / 1.98
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 57.942, 57.942, 427.945, 90.00, 90.00, 90.00
R / Rfree (%) 21.4 / 24.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna (pdb code 3ova). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna, PDB code: 3ova:

Magnesium binding site 1 out of 1 in 3ova

Go back to Magnesium Binding Sites List in 3ova
Magnesium binding site 1 out of 1 in the How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of How the Cca-Adding Enzyme Selects Adenine Over Cytosine in Position 76 of Trna within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:35.2
occ:1.00
O A:GLU59 2.7 22.5 1.0
O3G A:APC501 2.9 21.7 1.0
O1A A:APC501 3.0 18.8 1.0
OD1 A:ASP61 3.0 20.3 1.0
O2B A:APC501 3.1 21.1 1.0
CB A:GLU59 3.4 23.3 1.0
OE1 A:GLU59 3.5 21.2 1.0
CG A:GLU59 3.5 23.4 1.0
O A:HOH469 3.5 16.7 1.0
C A:GLU59 3.5 22.5 1.0
OG A:SER47 3.7 20.2 1.0
CD A:GLU59 3.8 23.0 1.0
CG A:ASP61 3.9 19.3 1.0
CA A:GLU59 3.9 23.6 1.0
PB A:APC501 4.0 21.1 1.0
C3A A:APC501 4.0 19.7 1.0
PA A:APC501 4.1 18.5 1.0
OD2 A:ASP61 4.1 19.2 1.0
PG A:APC501 4.2 23.2 1.0
N A:GLU59 4.2 24.4 1.0
O3B A:APC501 4.4 20.7 1.0
N A:ILE60 4.6 22.0 1.0
N A:SER47 4.9 19.5 1.0
OE2 A:GLU59 4.9 24.3 1.0
CB A:SER47 4.9 20.6 1.0

Reference:

B.Pan, Y.Xiong, T.A.Steitz. How the Cca-Adding Enzyme Selects Adenine Over Cytosine at Position 76 of Trna. Science V. 330 937 2010.
ISSN: ISSN 0036-8075
PubMed: 21071662
DOI: 10.1126/SCIENCE.1194985
Page generated: Thu Aug 15 08:30:43 2024

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