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Magnesium in PDB 3pc8: X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains.

Enzymatic activity of X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains.

All present enzymatic activity of X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains.:
6.5.1.1;

Protein crystallography data

The structure of X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains., PDB code: 3pc8 was solved by M.J.Cuneo, J.M.Krahn, R.E.London, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.51 / 2.31
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 66.320, 163.480, 36.740, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 24.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains. (pdb code 3pc8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains., PDB code: 3pc8:

Magnesium binding site 1 out of 1 in 3pc8

Go back to Magnesium Binding Sites List in 3pc8
Magnesium binding site 1 out of 1 in the X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of X-Ray Crystal Structure of the Heterodimeric Complex of XRCC1 and Dna Ligase III-Alpha Brct Domains. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1

b:96.8
occ:1.00
O B:HOH171 2.1 57.9 1.0
O B:HOH72 2.1 53.0 1.0
O B:HOH172 2.1 55.4 1.0
O B:HOH170 2.1 63.9 1.0
O B:HOH215 2.1 72.2 1.0
NE2 B:HIS545 2.1 37.3 1.0
CE1 B:HIS545 3.0 33.6 1.0
CD2 B:HIS545 3.1 35.3 1.0
ND1 B:HIS545 4.1 32.3 1.0
CG B:HIS545 4.2 32.9 1.0
O B:HOH139 4.4 46.3 1.0
O B:GLY543 4.5 43.5 1.0
C B:GLY543 4.9 38.6 1.0

Reference:

M.J.Cuneo, S.A.Gabel, J.M.Krahn, M.A.Ricker, R.E.London. The Structural Basis For Partitioning of the XRCC1/Dna Ligase III-{Alpha} Brct-Mediated Dimer Complexes. Nucleic Acids Res. V. 39 7816 2011.
ISSN: ISSN 0305-1048
PubMed: 21652643
DOI: 10.1093/NAR/GKR419
Page generated: Mon Dec 14 08:38:53 2020

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