Magnesium in PDB 3qnu: Crystal Structure of the Cytosolic Domain of Human Atlastin-1 in Complex with Gdp, Hexagonal Form

The structure of Crystal Structure of the Cytosolic Domain of Human Atlastin-1 in Complex with Gdp, Hexagonal Form, PDB code: 3qnu was solved by X.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.97 / 2.80
Space group	P 65 2 2
Cell size a, b, c (Å), α, β, γ (°)	144.889, 144.889, 103.694, 90.00, 90.00, 120.00
R / Rfree (%)	23.5 / 30.6

The binding sites of Magnesium atom in the Crystal Structure of the Cytosolic Domain of Human Atlastin-1 in Complex with Gdp, Hexagonal Form (pdb code 3qnu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Cytosolic Domain of Human Atlastin-1 in Complex with Gdp, Hexagonal Form, PDB code: 3qnu:

Magnesium binding site 1 out of 1 in the Crystal Structure of the Cytosolic Domain of Human Atlastin-1 in Complex with Gdp, Hexagonal Form


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Cytosolic Domain of Human Atlastin-1 in Complex with Gdp, Hexagonal Form within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg599 b:65.4 occ:1.00 O3B A:GDP593 2.5 56.3 1.0 OG A:SER81 2.5 66.6 1.0 O1B A:GDP593 3.2 56.1 1.0 CB A:SER81 3.3 58.7 1.0 PB A:GDP593 3.4 53.2 1.0 O2A A:GDP593 3.7 57.3 1.0 OE2 A:GLU117 3.8 91.7 1.0 CD A:GLU117 4.3 97.2 1.0 N A:SER81 4.3 54.4 1.0 O3A A:GDP593 4.4 63.8 1.0 CA A:SER81 4.4 56.0 1.0 O A:HOH459 4.4 59.5 1.0 PA A:GDP593 4.4 55.2 1.0 O2B A:GDP593 4.5 53.2 1.0 O A:HOH450 4.6 54.9 1.0 OE1 A:GLN148 4.6 62.3 1.0 O1A A:GDP593 4.7 56.0 1.0 OD2 A:ASP146 4.8 62.0 1.0 OE1 A:GLU117 4.8 0.1 1.0 CG A:GLU117 4.9 95.4 1.0

X.Bian, R.W.Klemm, T.Y.Liu, M.Zhang, S.Sun, X.Sui, X.Liu, T.A.Rapoport, J.Hu. Structures of the Atlastin Gtpase Provide Insight Into Homotypic Fusion of Endoplasmic Reticulum Membranes. Proc.Natl.Acad.Sci.Usa V. 108 3976 2011.
ISSN: ISSN 0027-8424
PubMed: 21368113
DOI: 10.1073/PNAS.1101643108