Magnesium in PDB 3r09: Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg

The structure of Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg, PDB code: 3r09 was solved by M.W.Vetting, Y.Patskovsky, R.Toro, J.Freeman, S.Miller, J.M.Sauder, S.K.Burley, D.Dunaway-Mariano, K.N.Allen, J.A.Gerlt, S.C.Almo, Enzymefunction Initiative (Efi), New York Sgx Research Center Forstructural Genomics (Nysgxrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.05 / 2.20
Space group	P 61 2 2
Cell size a, b, c (Å), α, β, γ (°)	66.299, 66.299, 251.290, 90.00, 90.00, 120.00
R / Rfree (%)	17.9 / 20.8

The binding sites of Magnesium atom in the Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg (pdb code 3r09). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg, PDB code: 3r09:

Magnesium binding site 1 out of 1 in the Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg206 b:35.5 occ:1.00 O A:HOH342 2.3 30.3 1.0 OD2 A:ASP12 2.3 37.5 1.0 O A:ASP14 2.3 24.3 1.0 O A:HOH343 2.4 39.0 1.0 O A:HOH314 2.4 24.9 1.0 OD1 A:ASP152 2.5 29.6 1.0 CG A:ASP12 3.1 26.9 1.0 OD1 A:ASP12 3.3 24.9 1.0 C A:ASP14 3.6 18.7 1.0 CG A:ASP152 3.6 33.2 1.0 OD2 A:ASP156 3.7 21.7 1.0 O A:HOH330 3.7 47.9 1.0 OD2 A:ASP152 4.0 36.5 1.0 CB A:ASP12 4.4 17.1 1.0 CA A:GLY15 4.5 18.3 1.0 N A:GLY15 4.5 20.3 1.0 CB A:TYR153 4.5 22.7 1.0 CA A:ASP14 4.5 22.4 1.0 OG1 A:THR16 4.5 15.9 1.0 CB A:ASP14 4.6 31.2 1.0 CG A:ASP156 4.6 19.9 1.0 O A:HOH318 4.6 40.4 1.0 N A:ASP14 4.6 21.1 1.0 OD1 A:ASP156 4.7 26.3 1.0 N A:ASP152 4.8 19.9 1.0 O A:HOH226 4.9 27.0 1.0 C A:GLY15 4.9 18.5 1.0 N A:THR16 4.9 15.1 1.0 O A:HOH215 4.9 26.0 1.0 CB A:ASP152 4.9 26.3 1.0

M.W.Vetting, Y.Patskovsky, R.Toro, J.Freeman, S.Miller, J.M.Sauder, S.K.Burley, D.Dunaway-Mariano, K.N.Allen, J.A.Gerlt, S.C.Almo. Crystal Structure of Probable Had Family Hydrolase From Pseudomonas Fluorescens Pf-5 with Bound Mg To Be Published.