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Magnesium in PDB 3r9r: Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196

Enzymatic activity of Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196

All present enzymatic activity of Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196:
6.3.2.6;

Protein crystallography data

The structure of Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196, PDB code: 3r9r was solved by Seattle Structural Genomics Center For Infectious Disease (Ssgcid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.30 / 1.85
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 47.901, 64.786, 48.357, 90.00, 110.48, 90.00
R / Rfree (%) 17.4 / 23.3

Other elements in 3r9r:

The structure of Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196 also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196 (pdb code 3r9r). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196, PDB code: 3r9r:

Magnesium binding site 1 out of 1 in 3r9r

Go back to Magnesium Binding Sites List in 3r9r
Magnesium binding site 1 out of 1 in the Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of A Phosphoribosylaminoimidazole-Succinocarboxamide Synthase From Mycobacterium Abscessus Atcc 19977 / Dsm 44196 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg300

b:33.4
occ:1.00
 OE2 A:GLU214 1.9 27.9 1.0
O A:HOH374 2.7 17.5 1.0
CD A:GLU214 3.1 25.0 1.0
CB A:ALA31 3.7 14.7 1.0
CD A:ARG17 3.7 25.8 1.0
O A:HOH416 3.8 20.3 1.0
OE1 A:GLU214 3.8 23.6 1.0
CB A:GLU214 3.8 19.2 1.0
CG A:GLU214 4.0 21.6 1.0
O A:HOH520 4.2 27.5 1.0
CB A:LEU53 4.3 11.4 1.0
CG A:ARG17 4.3 25.3 1.0
CE2 A:PHE29 4.5 25.8 1.0
CA A:ALA31 4.6 15.6 1.0
CG2 A:THR217 4.6 12.2 1.0
CD2 A:LEU53 4.7 11.7 1.0
O A:HOH358 4.8 12.2 1.0
O A:HOH449 4.8 16.3 1.0
C A:LEU53 4.8 11.5 1.0
NE A:ARG17 4.9 26.5 1.0
O A:LEU53 4.9 11.6 1.0
OG1 A:THR54 4.9 11.0 1.0
N A:THR54 5.0 10.9 1.0

Reference:

L.Baugh, I.Phan, D.W.Begley, M.C.Clifton, B.Armour, D.M.Dranow, B.M.Taylor, M.M.Muruthi, J.Abendroth, J.W.Fairman, D.Fox, S.H.Dieterich, B.L.Staker, A.S.Gardberg, R.Choi, S.N.Hewitt, A.J.Napuli, J.Myers, L.K.Barrett, Y.Zhang, M.Ferrell, E.Mundt, K.Thompkins, N.Tran, S.Lyons-Abbott, A.Abramov, A.Sekar, D.Serbzhinskiy, D.Lorimer, G.W.Buchko, R.Stacy, L.J.Stewart, T.E.Edwards, W.C.Van Voorhis, P.J.Myler. Increasing the Structural Coverage of Tuberculosis Drug Targets. Tuberculosis (Edinb) V. 95 142 2015.
ISSN: ISSN 1472-9792
PubMed: 25613812
DOI: 10.1016/J.TUBE.2014.12.003
Page generated: Mon Dec 14 08:44:17 2020

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