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Magnesium in PDB 3rt0: Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba)

Enzymatic activity of Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba)

All present enzymatic activity of Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba):
3.1.3.16;

Protein crystallography data

The structure of Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba), PDB code: 3rt0 was solved by Q.Hao, P.Yin, W.Li, L.Wang, C.Yan, J.Wang, N.Yan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.50 / 2.11
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.766, 83.503, 88.544, 90.00, 97.20, 90.00
R / Rfree (%) 17.3 / 20.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba) (pdb code 3rt0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba), PDB code: 3rt0:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 3rt0

Go back to Magnesium Binding Sites List in 3rt0
Magnesium binding site 1 out of 2 in the Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg512

b:16.6
occ:1.00
O A:HOH681 2.3 21.6 1.0
O A:HOH544 2.4 32.5 1.0
OD1 A:ASP432 2.4 26.3 1.0
O A:HOH727 2.4 29.4 0.9
OD2 A:ASP492 2.6 39.0 1.0
OD2 A:ASP243 2.6 19.9 1.0
OD1 A:ASP243 2.6 20.6 1.0
CG A:ASP243 3.0 20.1 1.0
CG A:ASP492 3.3 44.4 1.0
CG A:ASP432 3.4 29.4 1.0
OD1 A:ASP492 3.5 44.6 1.0
OD2 A:ASP432 3.7 40.0 1.0
O A:HOH525 3.8 23.8 1.0
O A:HOH517 4.2 20.9 1.0
OD1 A:ASP204 4.4 22.6 1.0
CB A:ASP243 4.5 11.4 1.0
N A:ASP432 4.5 21.6 1.0
N A:GLY433 4.5 21.7 1.0
O A:ASN493 4.6 16.6 1.0
O A:HOH523 4.6 22.5 1.0
CB A:ASP492 4.7 35.1 1.0
O A:HOH700 4.7 32.2 0.8
CB A:ASP432 4.7 27.4 1.0
O A:HOH515 4.8 20.6 1.0
CB A:SER431 4.8 18.0 1.0
CA A:ASP432 4.9 25.1 1.0
C A:ASP432 4.9 19.7 1.0

Magnesium binding site 2 out of 2 in 3rt0

Go back to Magnesium Binding Sites List in 3rt0
Magnesium binding site 2 out of 2 in the Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of PYL10-HAB1 Complex in the Absence of Abscisic Acid (Aba) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg512

b:19.9
occ:1.00
O B:HOH673 2.1 38.4 1.0
OD2 B:ASP492 2.3 32.1 1.0
O B:HOH674 2.4 36.9 1.0
O B:HOH675 2.4 38.5 1.0
OD1 B:ASP432 2.4 28.9 1.0
OD2 B:ASP243 2.5 16.6 1.0
OD1 B:ASP243 2.7 23.5 1.0
CG B:ASP243 2.9 21.8 1.0
CG B:ASP492 3.2 32.9 1.0
CG B:ASP432 3.4 27.2 1.0
OD1 B:ASP492 3.4 39.9 1.0
OD2 B:ASP432 3.6 33.6 1.0
O B:HOH514 3.7 27.1 1.0
O B:HOH521 4.3 26.0 1.0
OD1 B:ASP204 4.4 18.9 1.0
N B:GLY433 4.5 26.5 1.0
CB B:ASP243 4.5 19.1 1.0
O B:HOH584 4.6 34.1 1.0
CB B:ASP492 4.6 32.5 1.0
N B:ASP432 4.6 26.4 1.0
CB B:ASP432 4.7 27.4 1.0
O B:HOH525 4.8 25.7 1.0
O B:HOH527 4.8 22.5 0.9
O B:ASN493 4.8 21.6 1.0
CB B:SER431 4.9 20.7 1.0
C B:ASP432 4.9 30.7 1.0
CA B:ASP432 5.0 28.8 1.0

Reference:

Q.Hao, P.Yin, W.Li, L.Wang, C.Yan, Z.Lin, J.Z.Wu, J.Wang, S.F.Yan, N.Yan. The Molecular Basis of Aba-Independent Inhibition of PP2CS By A Subclass of Pyl Proteins Mol.Cell V. 42 662 2011.
ISSN: ISSN 1097-2765
PubMed: 21658606
DOI: 10.1016/J.MOLCEL.2011.05.011
Page generated: Mon Dec 14 08:46:09 2020

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