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Magnesium in PDB 3rtv: Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna
Enzymatic activity of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna
All present enzymatic activity of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna:
2.7.7.7;
2.7.7.7;
Protein crystallography data
The structure of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna, PDB code: 3rtv
was solved by
A.Marx,
K.Diederichs,
K.Betz,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 46.89 / 1.90 |
| Space group | P 31 2 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 108.296, 108.296, 90.381, 90.00, 90.00, 120.00 |
| R / Rfree (%) | 16.2 / 20.2 |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna
(pdb code 3rtv). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna, PDB code: 3rtv:
Jump to Magnesium binding site number: 1; 2; 3;
In total 3 binding sites of Magnesium where determined in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna, PDB code: 3rtv:
Jump to Magnesium binding site number: 1; 2; 3;
Magnesium binding site 1 out of 3 in 3rtv
Go back to
Magnesium Binding Sites List in 3rtv
Magnesium binding site 1 out
of 3 in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna within 5.0Å range:
|
Magnesium binding site 2 out of 3 in 3rtv
Go back to
Magnesium Binding Sites List in 3rtv
Magnesium binding site 2 out
of 3 in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna within 5.0Å range:
|
Magnesium binding site 3 out of 3 in 3rtv
Go back to
Magnesium Binding Sites List in 3rtv
Magnesium binding site 3 out
of 3 in the Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Crystal Structure of the Large Fragment of Dna Polymerase I From Thermus Aquaticus in A Closed Ternary Complex with Natural Primer/Template Dna within 5.0Å range:
|
Reference:
K.Betz,
D.A.Malyshev,
T.Lavergne,
W.Welte,
K.Diederichs,
T.J.Dwyer,
P.Ordoukhanian,
F.E.Romesberg,
A.Marx.
Klentaq Polymerase Replicates Unnatural Base Pairs By Inducing A Watson-Crick Geometry. Nat.Chem.Biol. V. 8 612 2012.
ISSN: ISSN 1552-4450
PubMed: 22660438
DOI: 10.1038/NCHEMBIO.966
Page generated: Thu Aug 15 10:38:47 2024
ISSN: ISSN 1552-4450
PubMed: 22660438
DOI: 10.1038/NCHEMBIO.966
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