Magnesium in PDB 3scy: Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution

The structure of Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution, PDB code: 3scy was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	27.05 / 1.50
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	49.463, 49.463, 216.435, 90.00, 90.00, 120.00
R / Rfree (%)	16.4 / 18.6

The structure of Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution also contains other interesting chemical elements:

Sodium

(Na)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution (pdb code 3scy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution, PDB code: 3scy:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg386 b:30.7 occ:1.00 O A:HOH659 1.9 31.2 1.0 O A:HOH660 2.0 35.8 1.0 O A:HOH661 2.0 37.4 1.0 O A:HOH658 2.1 34.6 1.0 O A:HOH663 2.1 30.5 1.0 O A:HOH520 2.2 33.3 1.0 O A:LYS222 4.2 28.3 1.0 O A:GLY223 4.2 27.1 1.0 O A:HOH721 4.3 61.6 1.0 OG1 A:THR224 4.3 31.0 1.0 O A:HOH584 4.3 40.1 1.0 O A:HOH642 4.6 47.6 1.0 OE2 A:GLU226 4.6 47.2 1.0 C A:GLY223 4.8 27.1 1.0 C A:LYS222 4.9 27.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Putative 6-Phosphogluconolactonase (BF1038) From Bacteroides Fragilis Nctc 9343 at 1.50 A Resolution within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg387 b:41.4 occ:1.00 O A:HOH456 2.0 36.0 1.0 O A:HOH669 2.1 48.6 1.0 O A:HOH602 2.1 38.1 1.0 O A:HOH670 2.2 42.2 1.0 O A:HOH594 2.2 45.8 1.0 O A:HOH527 2.3 39.1 1.0 O A:HOH549 3.9 44.9 1.0 O A:GLY233 4.0 28.6 1.0 O A:HOH671 4.1 49.8 1.0 O A:HOH534 4.1 34.4 1.0 CA A:GLY233 4.3 28.2 1.0 O A:HOH672 4.3 45.9 1.0 C A:GLY233 4.4 29.1 1.0 O A:PRO232 4.4 29.9 1.0 O A:HOH542 4.9 37.5 1.0

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.