Magnesium in PDB 3tlx: Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum

All present enzymatic activity of Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum:
2.7.4.3;

The structure of Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum, PDB code: 3tlx was solved by A.K.Wernimont, P.Loppnau, L.Crombet, J.Weadge, A.Perieteanu, A.M.Edwards, C.H.Arrowsmith, H.Park, C.Bountra, R.Hui, M.Amani, Structural Genomicsconsortium (Sgc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	34.56 / 2.75
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	81.395, 76.663, 93.768, 90.00, 100.78, 90.00
R / Rfree (%)	22.6 / 26

The binding sites of Magnesium atom in the Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum (pdb code 3tlx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum, PDB code: 3tlx:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg243 b:94.3 occ:1.00 OE1 A:GLN187 2.5 0.3 1.0 O A:ARG188 3.1 84.7 1.0 O A:GLU189 3.3 98.6 1.0 CD A:GLN187 3.4 0.4 1.0 CA A:GLU189 3.6 87.5 1.0 C A:GLU189 3.7 96.0 1.0 N A:ASN192 3.7 0.4 1.0 CB A:ASN192 3.8 0.0 1.0 C A:ARG188 3.9 84.2 1.0 NE2 A:GLN187 4.0 0.2 1.0 CA A:ASN192 4.0 0.2 1.0 N A:GLU189 4.1 83.5 1.0 C A:ASP191 4.3 0.3 1.0 N A:ASP191 4.5 94.6 1.0 CG A:GLN187 4.5 91.6 1.0 CB A:GLU189 4.7 90.1 1.0 N A:ASP190 4.8 92.1 1.0 CA A:ASP191 4.8 94.3 1.0 CB A:GLN187 4.8 74.9 1.0 O A:GLN187 4.9 79.9 1.0 O A:ASP191 5.0 0.2 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg244 b:84.1 occ:1.00 O A:HIS239 3.0 78.9 1.0 OE1 B:GLN132 3.2 0.3 1.0 O A:GLY242 3.5 0.2 1.0 C A:HIS239 3.7 77.8 1.0 CA A:HIS239 3.8 77.0 1.0 C A:GLY242 3.8 0.2 1.0 O A:GLN238 4.0 83.1 1.0 CD B:GLN132 4.1 0.2 1.0 OXT A:GLY242 4.3 0.5 1.0 NE2 B:GLN132 4.4 0.2 1.0 CA A:GLY242 4.4 85.2 1.0 CD2 A:HIS239 4.6 90.5 1.0 CB A:HIS239 4.6 78.2 1.0 N A:HIS239 4.8 76.8 1.0 N A:GLY242 4.8 77.4 1.0 C A:GLN238 4.8 81.5 1.0 CG A:HIS239 4.9 85.5 1.0 N A:ILE240 5.0 70.1 1.0

A.K.Wernimont, P.Loppnau, L.Crombet, J.Weadge, A.Perieteanu, A.M.Edwards, C.H.Arrowsmith, H.Park, C.Bountra, R.Hui, M.Amani. Crystal Structure of PF10_0086, Adenylate Kinase From Plasmodium Falciparum To Be Published.