Magnesium in PDB 3v3w: Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol

The structure of Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol, PDB code: 3v3w was solved by M.W.Vetting, R.Toro, R.Bhosle, S.R.Wasserman, L.L.Morisco, S.Sojitra, R.Seidel, B.Hillerich, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo, Enzyme Functioninitiative (Efi), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.11 / 1.40
Space group	I 4 2 2
Cell size a, b, c (Å), α, β, γ (°)	124.302, 124.302, 111.300, 90.00, 90.00, 90.00
R / Rfree (%)	13.8 / 15.3

The structure of Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol (pdb code 3v3w). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol, PDB code: 3v3w:

Magnesium binding site 1 out of 1 in the Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg403 b:9.4 occ:1.00 O A:HOH414 1.9 9.8 1.0 OE2 A:GLU236 2.1 7.7 1.0 O A:HOH496 2.1 13.3 1.0 OD2 A:ASP210 2.1 8.6 1.0 OE1 A:GLU262 2.1 8.6 1.0 O A:HOH527 2.2 12.1 1.0 CD A:GLU262 3.0 7.7 1.0 CG A:ASP210 3.1 8.9 1.0 CD A:GLU236 3.2 7.5 1.0 OE2 A:GLU262 3.3 9.1 1.0 OD1 A:ASP210 3.4 7.9 1.0 O A:HOH459 3.5 28.6 1.0 NH2 A:ARG283 3.8 7.9 1.0 OE1 A:GLU236 3.9 8.5 1.0 CD2 A:HIS212 4.0 16.4 1.0 O A:HOH470 4.1 9.6 1.0 CG A:GLU236 4.1 7.1 1.0 OD2 A:ASP237 4.1 10.3 1.0 O A:HOH542 4.2 17.1 1.0 O A:HOH461 4.2 8.6 1.0 NE2 A:HIS212 4.3 20.8 1.0 CB A:ASP210 4.3 8.0 1.0 OH A:TYR159 4.4 24.6 0.6 CG A:GLU262 4.4 8.2 1.0 NH1 A:ARG147 4.5 22.4 1.0 CG A:ASP237 4.7 8.6 1.0 CZ A:ARG283 4.8 7.9 1.0 NE A:ARG283 4.9 9.3 1.0 CD2 A:HIS312 4.9 7.7 1.0 CZ A:TYR159 4.9 24.8 0.6 CE2 A:TYR159 4.9 25.2 0.6

M.W.Vetting, R.Toro, R.Bhosle, S.R.Wasserman, L.L.Morisco, S.Sojitra, R.Seidel, B.Hillerich, E.Washington, A.Scott Glenn, S.Chowdhury, B.Evans, J.Hammonds, W.D.Zencheck, H.J.Imker, J.A.Gerlt, S.C.Almo. Crystal Structure of An Enolase From the Soil Bacterium Cellvibrio Japonicus (Target Efi-502161) with Bound Mg and Glycerol To Be Published.