Atomistry » Magnesium » PDB 3vth-3wca » 3w2x
Atomistry »
  Magnesium »
    PDB 3vth-3wca »
      3w2x »

Magnesium in PDB 3w2x: Crystal Structure of Dna Uridine Endonuclease MTH212

Enzymatic activity of Crystal Structure of Dna Uridine Endonuclease MTH212

All present enzymatic activity of Crystal Structure of Dna Uridine Endonuclease MTH212:
3.1.11.2;

Protein crystallography data

The structure of Crystal Structure of Dna Uridine Endonuclease MTH212, PDB code: 3w2x was solved by N.Tabata, T.Shida, R.Arai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.00 / 1.60
Space group P 65
Cell size a, b, c (Å), α, β, γ (°) 61.481, 61.481, 132.716, 90.00, 90.00, 120.00
R / Rfree (%) 21.3 / 23.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Dna Uridine Endonuclease MTH212 (pdb code 3w2x). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Dna Uridine Endonuclease MTH212, PDB code: 3w2x:

Magnesium binding site 1 out of 1 in 3w2x

Go back to Magnesium Binding Sites List in 3w2x
Magnesium binding site 1 out of 1 in the Crystal Structure of Dna Uridine Endonuclease MTH212


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Dna Uridine Endonuclease MTH212 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg301

b:26.8
occ:1.00
O A:HOH403 1.9 14.4 1.0
OD1 A:ASN12 2.0 28.2 1.0
O A:HOH421 2.1 20.4 1.0
O A:HOH409 2.1 21.0 1.0
OE2 A:GLU38 2.1 28.2 1.0
O A:HOH568 2.2 27.1 1.0
CG A:ASN12 3.0 25.5 1.0
CD A:GLU38 3.1 30.6 1.0
O A:HOH542 3.2 25.4 1.0
OE1 A:GLU38 3.4 32.7 1.0
CB A:ASN12 3.7 24.6 1.0
CA A:ASN12 3.9 23.6 1.0
OD1 A:ASP247 4.0 22.8 1.0
ND2 A:ASN12 4.1 30.0 1.0
OD2 A:ASP247 4.1 26.2 1.0
OD1 A:ASN10 4.2 24.3 1.0
CG A:GLU38 4.5 26.8 1.0
CG A:ASP247 4.5 23.0 1.0
ND2 A:ASN10 4.8 22.7 1.0
N A:ASN12 4.9 22.3 1.0
CB A:GLU38 4.9 23.4 1.0
CG A:ASN10 4.9 22.5 1.0
C A:ASN12 4.9 24.2 1.0

Reference:

N.Tabata, T.Shida, R.Arai. Crystal Structure of Dna Uridine Endonuclease MTH212 To Be Published.
Page generated: Mon Dec 14 09:00:08 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy