Magnesium in PDB 3w40: Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1

All present enzymatic activity of Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1:
3.1.3.3;

The structure of Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1, PDB code: 3w40 was solved by A.H.Teh, M.Makino, S.Baba, N.Shimizu, M.Yamamoto, T.Kumasaka, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.30
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	33.081, 41.608, 69.038, 81.00, 90.01, 71.14
R / Rfree (%)	17.6 / 22.9

The binding sites of Magnesium atom in the Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1 (pdb code 3w40). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1, PDB code: 3w40:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg201 b:7.1 occ:1.00 OD1 A:ASP156 2.0 8.1 1.0 O A:HOH353 2.1 7.2 1.0 OD2 A:ASP189 2.1 9.7 1.0 O A:HOH351 2.1 11.0 1.0 OD2 A:ASP44 2.1 8.1 1.0 O A:HOH352 2.1 11.0 1.0 CG A:ASP156 3.1 6.2 1.0 CG A:ASP189 3.1 10.0 1.0 CG A:ASP44 3.1 8.0 1.0 OD2 A:ASP156 3.4 7.7 1.0 OD1 A:ASP189 3.5 11.4 1.0 OD1 A:ASP44 3.5 8.7 1.0 NZ B:LYS147 3.9 11.0 1.0 O A:HOH357 4.0 12.1 1.0 O A:HOH432 4.0 14.1 1.0 O A:HOH364 4.1 8.2 1.0 O A:HOH354 4.2 9.2 1.0 OD1 A:ASP27 4.2 7.1 1.0 N A:GLY157 4.2 7.7 1.0 O A:ASP190 4.3 7.6 1.0 CB A:ASP156 4.4 6.5 1.0 CB A:ASP189 4.4 10.7 1.0 CB A:ASP44 4.5 7.6 1.0 N A:ASP156 4.5 6.6 1.0 C A:ASP156 4.6 8.6 1.0 CA A:ASP156 4.7 7.3 1.0 CE B:LYS147 4.8 11.5 1.0 O A:HOH457 4.8 22.0 1.0 CB A:THR155 4.9 6.4 1.0 CA A:GLY157 5.0 9.4 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Rsbx in Complex with Magnesium in Space Group P1 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg201 b:7.3 occ:1.00 OD1 B:ASP156 2.0 8.3 1.0 O B:HOH353 2.0 8.0 1.0 OD2 B:ASP189 2.1 9.6 1.0 O B:HOH351 2.1 11.4 1.0 OD2 B:ASP44 2.1 8.1 1.0 O B:HOH352 2.1 11.0 1.0 CG B:ASP156 3.0 7.1 1.0 CG B:ASP189 3.1 11.0 1.0 CG B:ASP44 3.1 9.0 1.0 OD2 B:ASP156 3.4 9.5 1.0 OD1 B:ASP189 3.5 12.0 1.0 OD1 B:ASP44 3.5 10.7 1.0 O B:HOH372 4.0 13.8 1.0 O B:HOH358 4.0 11.8 1.0 O B:HOH356 4.1 9.0 1.0 O B:HOH354 4.2 9.6 1.0 OD1 B:ASP27 4.2 7.1 1.0 N B:GLY157 4.3 7.4 1.0 O B:ASP190 4.3 6.9 1.0 CB B:ASP189 4.4 10.4 1.0 CB B:ASP156 4.4 8.6 1.0 CB B:ASP44 4.5 7.6 1.0 N B:ASP156 4.5 7.1 1.0 C B:ASP156 4.7 7.6 1.0 CA B:ASP156 4.7 8.0 1.0 CB B:THR155 4.9 5.8 1.0 O B:HOH446 4.9 19.6 1.0 CA B:GLY157 5.0 8.6 1.0

M.Makino, A.H.Teh, T.Hoshino, S.Baba, N.Shimizu, M.Yamamoto, T.Kumasaka. Structural Basis For Di-Metal Coordination and Negative Feedback in General Stress Response By Rsbx Phosphatase From Bacillus Subtilis To Be Published.