Magnesium in PDB 3wgm: Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp

The structure of Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp, PDB code: 3wgm was solved by X.Han, T.Matsui, J.Yu, I.Tanaka, M.Yao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.82 / 2.09
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	44.530, 89.640, 66.580, 90.00, 96.11, 90.00
R / Rfree (%)	19.3 / 22.7

The binding sites of Magnesium atom in the Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp (pdb code 3wgm). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp, PDB code: 3wgm:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:24.5 occ:1.00 O A:HOH513 2.1 24.2 1.0 O A:HOH503 2.2 19.7 1.0 O1G A:GTP401 2.3 22.1 1.0 O A:HOH511 2.5 19.9 1.0 O1B A:GTP401 2.5 12.5 1.0 O A:HOH512 2.7 35.2 1.0 PG A:GTP401 3.4 21.1 1.0 O A:HOH507 3.6 25.1 1.0 O2G A:GTP401 3.6 16.8 1.0 PB A:GTP401 3.6 12.4 1.0 O3B A:GTP401 3.9 21.5 1.0 O3A A:GTP401 4.1 12.7 1.0 N A:GLY21 4.2 17.0 1.0 O2A A:GTP401 4.2 20.1 1.0 O A:HOH506 4.3 20.5 1.0 CA A:GLY21 4.4 16.6 1.0 OD1 A:ASN44 4.6 16.3 1.0 CB A:ASP46 4.7 24.2 1.0 O3G A:GTP401 4.7 19.8 1.0 PA A:GTP401 4.7 17.1 1.0 ND2 A:ASN44 4.8 16.2 1.0 CA A:GLY70 4.8 17.2 1.0 OD2 A:ASP46 4.8 37.0 1.0 O2B A:GTP401 4.9 17.6 1.0

Magnesium binding site 2 out of 2 in the Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Staphylococcus Aureus Ftsz T7 Mutant Substituted For Gan Bound with Gtp, DELTAT7GAN-Gtp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:18.6 occ:1.00 O B:HOH519 2.1 20.5 1.0 O B:HOH508 2.3 15.2 1.0 O1G B:GTP401 2.4 19.2 1.0 O1B B:GTP401 2.5 10.0 1.0 O B:HOH509 2.5 14.0 1.0 O B:HOH520 2.7 22.3 1.0 PG B:GTP401 3.5 17.2 1.0 PB B:GTP401 3.5 12.0 1.0 O2G B:GTP401 3.8 14.3 1.0 O3B B:GTP401 3.9 18.6 1.0 N B:GLY21 3.9 11.3 1.0 O2A B:GTP401 3.9 16.4 1.0 O3A B:GTP401 4.0 16.2 1.0 CA B:GLY21 4.1 10.4 1.0 PA B:GTP401 4.5 16.1 1.0 O B:HOH521 4.5 20.9 1.0 ND2 B:ASN44 4.5 11.2 1.0 OD1 B:ASN44 4.5 14.7 1.0 CB B:ASP46 4.7 21.0 1.0 O3G B:GTP401 4.8 13.5 1.0 O2B B:GTP401 4.8 13.6 1.0 OD2 B:ASP46 5.0 38.1 1.0 O1A B:GTP401 5.0 10.7 1.0

T.Matsui, X.Han, J.Yu, M.Yao, I.Tanaka. Structural Change in Ftsz Induced By Intermolecular Interactions Between Bound Gtp and the T7 Loop J.Biol.Chem. V. 289 3501 2014.
ISSN: ISSN 0021-9258
PubMed: 24347164
DOI: 10.1074/JBC.M113.514901