Magnesium in PDB 469d: Crystal Structure and Improved Antisense Properties of 2'-O-(2- Methoxyethyl)-Rna

The structure of Crystal Structure and Improved Antisense Properties of 2'-O-(2- Methoxyethyl)-Rna, PDB code: 469d was solved by M.Teplova, G.Minasov, V.Tereshko, G.Inamati, P.D.Cook, M.Egli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	8.00 / 1.70
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	41.200, 34.440, 46.620, 90.00, 92.40, 90.00
R / Rfree (%)	20.6 / 25.8

The binding sites of Magnesium atom in the Crystal Structure and Improved Antisense Properties of 2'-O-(2- Methoxyethyl)-Rna (pdb code 469d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure and Improved Antisense Properties of 2'-O-(2- Methoxyethyl)-Rna, PDB code: 469d:

Magnesium binding site 1 out of 1 in the Crystal Structure and Improved Antisense Properties of 2'-O-(2- Methoxyethyl)-Rna


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure and Improved Antisense Properties of 2'-O-(2- Methoxyethyl)-Rna within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg100 b:34.9 occ:0.50 O B:HOH103 2.2 23.2 1.0 O B:HOH101 2.2 18.9 1.0 O A:HOH102 2.2 20.6 1.0 OP1 A:C433 4.1 30.4 1.0 OP1 A:G484 4.2 26.7 1.0 OP1 B:C4315 4.4 22.7 1.0 OP2 A:G484 4.5 21.8 1.0 O B:HOH111 4.5 27.2 1.0 P A:G484 4.8 19.6 1.0 OP1 B:G4814 4.9 35.2 1.0

M.Teplova, G.Minasov, V.Tereshko, G.B.Inamati, P.D.Cook, M.Manoharan, M.Egli. Crystal Structure and Improved Antisense Properties of 2'-O-(2-Methoxyethyl)-Rna. Nat.Struct.Biol. V. 6 535 1999.
ISSN: ISSN 1072-8368
PubMed: 10360355
DOI: 10.1038/9304