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Magnesium in PDB 4ac5: Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography
Protein crystallography data
The structure of Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography, PDB code: 4ac5
was solved by
L.C.Johansson,
D.Arnlund,
T.A.White,
G.Katona,
D.P.Deponte,
U.Weierstall,
R.B.Doak,
R.L.Shoeman,
L.Lomb,
E.Malmerberg,
J.Davidsson,
K.Nass,
M.Liang,
J.Andreasson,
A.Aquila,
S.Bajt,
M.Barthelmess,
A.Barty,
M.J.Bogan,
C.Bostedt,
J.D.Bozek,
C.Caleman,
R.Coffee,
N.Coppola,
T.Ekeberg,
S.W.Epp,
B.Erk,
H.Fleckenstein,
L.Foucar,
H.Graafsma,
L.Gumprecht,
J.Hajdu,
C.Y.Hampton,
R.Hartmann,
A.Hartmann,
G.Hauser,
H.Hirsemann,
P.Holl,
M.S.Hunter,
S.Kassemeyer,
N.Kimmel,
R.A.Kirian,
F.R.N.C.Maia,
S.Marchesini,
A.V.Martin,
C.Reich,
D.Rolles,
B.Rudek,
A.Rudenko,
I.Schlichting,
J.Schulz,
M.M.Seibert,
R.Sierra,
H.Soltau,
D.Starodub,
F.Stellato,
S.Stern,
L.Struder,
N.Timneanu,
J.Ullrich,
W.Y.Wahlgren,
X.Wang,
G.Weidenspointner,
C.Wunderer,
P.Fromme,
H.N.Chapman,
J.C.H.Spence,
R.Neutze,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 46.10 / 8.20 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 57.500, 84.600, 375.800, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 35.1 / 38.4 |
Other elements in 4ac5:
The structure of Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography also contains other interesting chemical elements:
| Iron | (Fe) | 5 atoms |
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography
(pdb code 4ac5). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography, PDB code: 4ac5:
Jump to Magnesium binding site number: 1; 2; 3; 4;
In total 4 binding sites of Magnesium where determined in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography, PDB code: 4ac5:
Jump to Magnesium binding site number: 1; 2; 3; 4;
Magnesium binding site 1 out of 4 in 4ac5
Go back to
Magnesium Binding Sites List in 4ac5
Magnesium binding site 1 out
of 4 in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography within 5.0Å range:
|
Magnesium binding site 2 out of 4 in 4ac5
Go back to
Magnesium Binding Sites List in 4ac5
Magnesium binding site 2 out
of 4 in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography within 5.0Å range:
|
Magnesium binding site 3 out of 4 in 4ac5
Go back to
Magnesium Binding Sites List in 4ac5
Magnesium binding site 3 out
of 4 in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography within 5.0Å range:
|
Magnesium binding site 4 out of 4 in 4ac5
Go back to
Magnesium Binding Sites List in 4ac5
Magnesium binding site 4 out
of 4 in the Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Lipidic Sponge Phase Crystal Structure of the Bl. Viridis Reaction Centre Solved Using Serial Femtosecond Crystallography within 5.0Å range:
|
Reference:
L.C.Johansson,
D.Arnlund,
T.A.White,
G.Katona,
D.P.Deponte,
U.Weierstall,
R.B.Doak,
R.L.Shoeman,
L.Lomb,
E.Malmerberg,
J.Davidsson,
K.Nass,
M.Liang,
J.Andreasson,
A.Aquila,
S.Bajt,
M.Barthelmess,
A.Barty,
M.J.Bogan,
C.Bostedt,
J.D.Bozek,
C.Caleman,
R.Coffee,
N.Coppola,
T.Ekeberg,
S.W.Epp,
B.Erk,
H.Fleckenstein,
L.Foucar,
H.Graafsma,
L.Gumprecht,
J.Hajdu,
C.Y.Hampton,
R.Hartmann,
A.Hartmann,
G.Hauser,
H.Hirsemann,
P.Holl,
M.S.Hunter,
S.Kassemeyer,
N.Kimmel,
R.A.Kirian,
F.R.N.C.Maia,
S.Marchesini,
A.V.Martin,
C.Reich,
D.Rolles,
B.Rudek,
A.Rudenko,
I.Schlichting,
J.Schulz,
M.M.Seibert,
R.Sierra,
H.Soltau,
D.Starodub,
F.Stellato,
S.Stern,
L.Struder,
N.Timneanu,
J.Ullrich,
W.Y.Wahlgren,
X.Wang,
G.Weidenspointner,
C.Wunderer,
P.Fromme,
H.N.Chapman,
J.C.H.Spence,
R.Neutze.
Lipidic Phase Membrane Protein Serial Femtosecond Crystallography. Nat.Methods V. 9 263 2012.
ISSN: ISSN 1548-7091
PubMed: 22286383
DOI: 10.1038/NMETH.1867
Page generated: Thu Aug 15 14:27:30 2024
ISSN: ISSN 1548-7091
PubMed: 22286383
DOI: 10.1038/NMETH.1867
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