Magnesium in PDB 4agz: Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution.

The structure of Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution., PDB code: 4agz was solved by D.G.Munnur, E.P.Mitchell, V.T.Forsyth, S.C.M.Teixeira, S.Neidle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	14.76 / 1.25
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	24.026, 39.905, 65.784, 90.00, 90.00, 90.00
R / Rfree (%)	15.5 / 20.7

The binding sites of Magnesium atom in the Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution. (pdb code 4agz). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution., PDB code: 4agz:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1013 b:11.0 occ:1.00 O A:HOH2073 2.1 11.3 1.0 O A:HOH2061 2.1 11.7 1.0 O A:HOH2060 2.1 11.6 1.0 OP1 A:DA6 4.3 13.3 1.0 O A:HOH2071 4.3 13.2 1.0 OP2 A:DT7 4.4 11.9 1.0 OP2 A:DA6 4.5 13.4 1.0 P A:DA6 4.7 12.9 1.0 O5' A:DA6 4.7 11.2 1.0 C3' A:DA6 4.9 10.6 1.0

Magnesium binding site 2 out of 3 in the Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1014 b:15.2 occ:0.25 O A:HOH2044 2.0 30.4 1.0 O A:HOH2041 2.1 20.6 0.5 OP1 A:DG4 3.7 20.5 1.0 O A:HOH2051 4.0 31.3 1.0 O3' A:DC3 4.6 14.6 1.0 P A:DG4 4.9 17.7 1.0

Magnesium binding site 3 out of 3 in the Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of the Db 985-D(Cgcgaattcgcg)2 Complex at 1.25 A Resolution. within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1026 b:16.4 occ:0.25 O B:HOH2097 1.9 23.2 0.5 O B:HOH2059 2.1 28.1 1.0 O B:HOH2053 2.1 32.5 1.0 O B:HOH2098 2.2 36.8 1.0 O B:HOH2057 3.8 37.7 1.0 OP2 B:DT20 4.3 18.0 1.0 OP1 B:DT19 4.4 25.6 1.0 P B:DT20 4.9 17.1 1.0 O B:HOH2061 4.9 23.7 1.0 OP1 B:DT20 4.9 19.5 1.0

D.G.Munnur, E.P.Mitchell, V.T.Forsyth, S.C.M.Teixeira, S.Neidle. A Detailed Study of Water Network in the Minor Groove of D(Cgcgaattcgcg)2 and D(Cgcaaatttgcg)2 in Presence of Linear Groove Binders To Be Published.