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Magnesium in PDB 4axo: Structure of the Clostridium Difficile Eutq Protein

Protein crystallography data

The structure of Structure of the Clostridium Difficile Eutq Protein, PDB code: 4axo was solved by A.C.Pitts, L.R.Tuck, A.Faulds-Pain, R.J.Lewis, J.Marles-Wright, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.50 / 1.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 82.332, 66.578, 58.950, 90.00, 117.54, 90.00
R / Rfree (%) 13.6 / 14.7

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Clostridium Difficile Eutq Protein (pdb code 4axo). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Clostridium Difficile Eutq Protein, PDB code: 4axo:

Magnesium binding site 1 out of 1 in 4axo

Go back to Magnesium Binding Sites List in 4axo
Magnesium binding site 1 out of 1 in the Structure of the Clostridium Difficile Eutq Protein


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Clostridium Difficile Eutq Protein within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1166

b:12.5
occ:1.00
O B:HOH2168 2.1 16.0 1.0
OD2 B:ASP114 2.1 10.9 1.0
O B:HOH2130 2.1 15.1 1.0
O B:HOH2129 2.1 11.9 1.0
O B:HOH2128 2.1 14.0 1.0
CG B:ASP114 3.1 10.2 1.0
HH12 B:ARG116 3.3 11.3 1.0
OD1 B:ASP114 3.4 12.0 1.0
O B:HOH2066 3.9 16.5 0.5
O B:HOH2131 4.0 13.2 1.0
NH1 B:ARG116 4.1 9.4 1.0
O B:HOH2067 4.3 36.2 1.0
CB B:ASP114 4.4 9.4 1.0
HH11 B:ARG116 4.5 11.3 1.0
HB3 B:ASP114 4.5 11.3 1.0
HB2 B:ASP114 4.5 11.3 1.0
HH22 B:ARG116 4.6 10.9 1.0

Reference:

A.C.Pitts, L.R.Tuck, A.Faulds-Pain, R.J.Lewis, J.Marles-Wright. Structural Insight Into the Clostridium Difficile Ethanolamine Utilisation Microcompartment. Plos One V. 7 48360 2012.
ISSN: ESSN 1932-6203
PubMed: 23144756
DOI: 10.1371/JOURNAL.PONE.0048360
Page generated: Mon Dec 14 09:09:25 2020

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