Magnesium in PDB 4ayx: Structure of the Human Mitochondrial Abc Transporter, ABCB10 (Rod Form B)

The structure of Structure of the Human Mitochondrial Abc Transporter, ABCB10 (Rod Form B), PDB code: 4ayx was solved by A.C.W.Pike, C.A.Shintre, Q.Li, J.Kim, F.Von Delft, A.J.Barr, S.Das, A.Chaikuad, X.Xia, A.Quigley, Y.Dong, L.Dong, T.Krojer, M.Vollmar, J.R.C.Muniz, J.E.Bray, G.Berridge, R.Chalk, O.Gileadi, N.Burgess-Brown, L.Shrestha, S.Goubin, J.Yang, P.Mahajan, S.Mukhopadhyay, A.N.Bullock, C.H.Arrowsmith, J.Weigelt, C.Bountra, A.M.Edwards, E.P.Carpenter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.00 / 2.90
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	180.136, 180.136, 50.565, 90.00, 90.00, 120.00
R / Rfree (%)	22.3 / 26.7

The binding sites of Magnesium atom in the Structure of the Human Mitochondrial Abc Transporter, ABCB10 (Rod Form B) (pdb code 4ayx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Human Mitochondrial Abc Transporter, ABCB10 (Rod Form B), PDB code: 4ayx:

Magnesium binding site 1 out of 1 in the Structure of the Human Mitochondrial Abc Transporter, ABCB10 (Rod Form B)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Human Mitochondrial Abc Transporter, ABCB10 (Rod Form B) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg801 b:0.5 occ:1.00 OG A:SER534 2.5 89.6 1.0 O3G A:ACP900 2.7 0.6 1.0 OE1 A:GLN575 2.7 0.5 1.0 O2B A:ACP900 2.8 0.1 1.0 OD1 A:ASP658 3.6 0.0 1.0 CB A:SER534 3.7 81.0 1.0 CD A:GLN575 3.8 0.9 1.0 OD2 A:ASP658 3.9 0.8 1.0 PG A:ACP900 4.0 0.5 1.0 CG A:ASP658 4.1 99.5 1.0 PB A:ACP900 4.1 0.4 1.0 O A:HOH2023 4.3 68.6 1.0 C3B A:ACP900 4.3 0.1 1.0 O1A A:ACP900 4.5 0.1 1.0 NE2 A:GLN575 4.5 0.8 1.0 O1G A:ACP900 4.7 0.3 1.0 CA A:SER534 4.8 78.7 1.0 N A:SER534 4.9 81.3 1.0 CB A:GLN575 4.9 92.3 1.0 CG A:GLN575 5.0 0.9 1.0

C.A.Shintre, A.C.W.Pike, Q.Li, J.Kim, A.J.Barr, S.Goubin, L.Shrestha, J.Yang, G.Berridge, J.Ross, P.J.Stansfeld, M.S.P.Sansom, A.M.Edwards, C.Bountra, B.D.Marsden, F.Von Delft, A.N.Bullock, O.Gileadi, N.A.Burgess-Brown, E.P.Carpenter. Structures of ABCB10, A Human Atp-Binding Cassette Transporter in Apo- and Nucleotide-Bound States Proc.Natl.Acad.Sci.Usa V. 110 9710 2013.
ISSN: ISSN 0027-8424
PubMed: 23716676
DOI: 10.1073/PNAS.1217042110