Magnesium in PDB 4bcl: Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature

The structure of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature, PDB code: 4bcl was solved by D.E.Tronrud, B.W.Matthews, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	20.00 / 1.90
Space group	P 63
Cell size a, b, c (Å), α, β, γ (°)	111.900, 111.900, 98.300, 90.00, 90.00, 120.00
R / Rfree (%)	n/a / n/a

The binding sites of Magnesium atom in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature (pdb code 4bcl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 7 binding sites of Magnesium where determined in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature, PDB code: 4bcl:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7;

Magnesium binding site 1 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg367 b:19.1 occ:1.00 MG A:BCL367 0.0 19.1 1.0 NB A:BCL367 2.0 16.4 1.0 NC A:BCL367 2.0 17.7 1.0 NE2 A:HIS110 2.1 24.1 1.0 NA A:BCL367 2.1 17.2 1.0 ND A:BCL367 2.1 9.9 1.0 CE1 A:HIS110 2.9 31.1 1.0 C4B A:BCL367 2.9 14.7 1.0 C1B A:BCL367 3.0 21.7 1.0 C1C A:BCL367 3.0 27.5 1.0 C4D A:BCL367 3.0 18.8 1.0 C4C A:BCL367 3.1 20.9 1.0 C4A A:BCL367 3.1 23.5 1.0 C1D A:BCL367 3.2 19.9 1.0 C1A A:BCL367 3.3 28.5 1.0 CD2 A:HIS110 3.3 20.8 1.0 CHC A:BCL367 3.3 21.7 1.0 CHB A:BCL367 3.4 18.8 1.0 CHA A:BCL367 3.5 16.5 1.0 CHD A:BCL367 3.5 13.4 1.0 C3 A:BCL367 3.9 20.9 1.0 C2 A:BCL367 4.0 15.9 1.0 ND1 A:HIS110 4.1 20.5 1.0 C3D A:BCL367 4.2 20.0 1.0 C3B A:BCL367 4.2 21.2 1.0 C2B A:BCL367 4.3 16.9 1.0 CG A:HIS110 4.3 22.4 1.0 C5 A:BCL367 4.3 15.2 1.0 C2C A:BCL367 4.3 17.8 1.0 C3C A:BCL367 4.3 23.6 1.0 C2D A:BCL367 4.4 14.7 1.0 C4 A:BCL367 4.4 20.1 1.0 C1 A:BCL367 4.4 26.0 1.0 C2A A:BCL367 4.5 17.3 1.0 C3A A:BCL367 4.5 19.6 1.0 O2A A:BCL367 4.7 20.9 1.0 CD2 A:LEU103 4.8 35.8 1.0 C6 A:BCL367 4.9 20.9 1.0 CBD A:BCL367 5.0 14.3 1.0

Magnesium binding site 2 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg368 b:13.0 occ:1.00 MG A:BCL368 0.0 13.0 1.0 ND A:BCL368 1.9 15.9 1.0 NB A:BCL368 2.0 9.3 1.0 NC A:BCL368 2.1 13.7 1.0 NA A:BCL368 2.1 12.7 1.0 NE2 A:HIS145 2.1 14.7 1.0 C4D A:BCL368 2.9 10.1 1.0 CD2 A:HIS145 2.9 12.9 1.0 C1B A:BCL368 3.0 16.5 1.0 C4B A:BCL368 3.0 17.1 1.0 C1C A:BCL368 3.0 6.3 1.0 C4A A:BCL368 3.1 17.0 1.0 C1D A:BCL368 3.1 10.1 1.0 C1A A:BCL368 3.1 13.5 1.0 C4C A:BCL368 3.1 10.7 1.0 CE1 A:HIS145 3.3 20.9 1.0 CHB A:BCL368 3.4 7.7 1.0 CHA A:BCL368 3.4 15.3 1.0 CHC A:BCL368 3.4 7.1 1.0 CHD A:BCL368 3.5 11.6 1.0 C3D A:BCL368 4.1 11.3 1.0 C2B A:BCL368 4.1 10.9 1.0 C3B A:BCL368 4.2 13.4 1.0 C19 A:BCL371 4.2 31.5 1.0 CG A:HIS145 4.2 20.6 1.0 C2D A:BCL368 4.3 23.9 1.0 ND1 A:HIS145 4.3 18.0 1.0 C2C A:BCL368 4.4 12.8 1.0 C3A A:BCL368 4.4 21.9 1.0 C3C A:BCL368 4.4 14.4 1.0 C2A A:BCL368 4.5 15.3 1.0 C20 A:BCL371 4.8 40.2 1.0 CBD A:BCL368 4.9 19.4 1.0 CG2 A:VAL118 4.9 9.5 1.0 CMA A:BCL368 5.0 13.3 1.0 CBA A:BCL368 5.0 22.3 1.0

Magnesium binding site 3 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg369 b:13.0 occ:1.00 MG A:BCL369 0.0 13.0 1.0 NB A:BCL369 2.0 8.2 1.0 NC A:BCL369 2.0 12.6 1.0 ND A:BCL369 2.1 10.5 1.0 NE2 A:HIS290 2.1 12.4 1.0 NA A:BCL369 2.1 14.2 1.0 CE1 A:HIS290 3.0 18.3 1.0 C1C A:BCL369 3.0 12.3 1.0 C4D A:BCL369 3.0 13.6 1.0 C4B A:BCL369 3.0 13.5 1.0 C1B A:BCL369 3.1 10.6 1.0 C4C A:BCL369 3.1 13.4 1.0 C4A A:BCL369 3.1 16.3 1.0 CD2 A:HIS290 3.1 8.1 1.0 C1D A:BCL369 3.2 11.6 1.0 C1A A:BCL369 3.2 8.5 1.0 CHC A:BCL369 3.3 8.2 1.0 CHB A:BCL369 3.4 7.2 1.0 CHD A:BCL369 3.5 16.1 1.0 CHA A:BCL369 3.5 11.2 1.0 C4 A:BCL369 4.0 15.0 1.0 ND1 A:HIS290 4.1 7.3 1.0 C3D A:BCL369 4.2 12.6 1.0 C3B A:BCL369 4.2 6.2 1.0 C2B A:BCL369 4.3 9.7 1.0 CG A:HIS290 4.3 14.8 1.0 C2D A:BCL369 4.3 10.8 1.0 C2C A:BCL369 4.3 15.4 1.0 C3A A:BCL369 4.3 16.3 1.0 C3C A:BCL369 4.4 17.4 1.0 C2A A:BCL369 4.5 11.2 1.0 O2A A:BCL369 4.8 15.2 1.0 C3 A:BCL369 4.8 12.8 1.0 CMA A:BCL369 4.8 12.0 1.0 C4 A:BCL373 4.8 15.8 1.0 CBD A:BCL369 5.0 8.3 1.0

Magnesium binding site 4 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg370 b:13.1 occ:1.00 MG A:BCL370 0.0 13.1 1.0 ND A:BCL370 2.0 14.8 1.0 ND1 A:HIS297 2.0 11.9 1.0 NB A:BCL370 2.1 11.2 1.0 NA A:BCL370 2.1 15.3 1.0 NC A:BCL370 2.1 11.2 1.0 CE1 A:HIS297 2.9 15.5 1.0 C4D A:BCL370 2.9 11.3 1.0 C4B A:BCL370 3.0 14.8 1.0 C1B A:BCL370 3.0 12.4 1.0 C1D A:BCL370 3.0 10.7 1.0 C1C A:BCL370 3.1 26.5 1.0 C4A A:BCL370 3.1 15.5 1.0 C4C A:BCL370 3.2 21.1 1.0 CG A:HIS297 3.2 10.1 1.0 C1A A:BCL370 3.2 17.9 1.0 CHC A:BCL370 3.3 14.8 1.0 CHB A:BCL370 3.4 15.5 1.0 CHA A:BCL370 3.5 13.7 1.0 CHD A:BCL370 3.5 13.2 1.0 CB A:HIS297 3.6 5.0 1.0 C4 A:BCL371 3.8 17.1 1.0 NE2 A:HIS297 4.1 9.9 1.0 C3B A:BCL370 4.1 13.5 1.0 C2B A:BCL370 4.1 15.3 1.0 C3D A:BCL370 4.2 13.6 1.0 CD2 A:HIS297 4.3 6.5 1.0 C2D A:BCL370 4.3 12.8 1.0 C2C A:BCL370 4.4 22.9 1.0 CG2 A:ILE293 4.4 10.4 1.0 C3C A:BCL370 4.4 15.3 1.0 C3 A:BCL371 4.5 24.6 1.0 C3A A:BCL370 4.5 3.6 1.0 C2A A:BCL370 4.6 15.2 1.0 CBD A:BCL370 4.9 9.4 1.0 C5 A:BCL371 5.0 18.3 1.0

Magnesium binding site 5 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg371 b:11.7 occ:1.00 MG A:BCL371 0.0 11.7 1.0 NB A:BCL371 2.0 14.6 1.0 ND A:BCL371 2.0 11.0 1.0 NA A:BCL371 2.1 8.4 1.0 NC A:BCL371 2.1 10.6 1.0 NE2 A:HIS298 2.1 14.6 1.0 C4D A:BCL371 2.9 11.1 1.0 C1B A:BCL371 3.0 14.0 1.0 C4B A:BCL371 3.0 12.4 1.0 C1C A:BCL371 3.0 12.3 1.0 CD2 A:HIS298 3.1 10.3 1.0 C4A A:BCL371 3.1 6.3 1.0 CE1 A:HIS298 3.1 9.2 1.0 C1A A:BCL371 3.2 16.6 1.0 C1D A:BCL371 3.2 16.1 1.0 C4C A:BCL371 3.2 16.3 1.0 CHC A:BCL371 3.3 13.2 1.0 CHA A:BCL371 3.4 18.4 1.0 CHB A:BCL371 3.4 12.9 1.0 CHD A:BCL371 3.6 11.3 1.0 C3D A:BCL371 4.2 6.8 1.0 C2B A:BCL371 4.2 14.2 1.0 CG A:HIS298 4.2 16.3 1.0 C3B A:BCL371 4.3 13.2 1.0 ND1 A:HIS298 4.3 11.5 1.0 C2C A:BCL371 4.3 9.0 1.0 C2D A:BCL371 4.4 13.9 1.0 C3C A:BCL371 4.5 10.9 1.0 C2A A:BCL371 4.5 17.3 1.0 CBC A:BCL369 4.5 14.5 1.0 C3A A:BCL371 4.5 15.6 1.0 CD1 A:ILE265 4.8 16.2 1.0 CG2 A:VAL301 4.8 7.4 1.0 CBD A:BCL371 4.9 9.2 1.0

Magnesium binding site 6 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg372 b:15.3 occ:1.00 MG A:BCL372 0.0 15.3 1.0 NB A:BCL372 1.9 12.2 1.0 O A:HOH386 1.9 14.7 1.0 ND A:BCL372 2.0 14.4 1.0 NC A:BCL372 2.1 8.4 1.0 NA A:BCL372 2.1 10.4 1.0 C4D A:BCL372 2.9 15.2 1.0 C4B A:BCL372 2.9 4.6 1.0 C1B A:BCL372 3.0 20.6 1.0 C4A A:BCL372 3.1 15.9 1.0 C4C A:BCL372 3.1 16.5 1.0 C1D A:BCL372 3.1 12.5 1.0 C1C A:BCL372 3.2 10.8 1.0 C1A A:BCL372 3.2 15.6 1.0 CHB A:BCL372 3.4 22.5 1.0 CHA A:BCL372 3.5 10.1 1.0 CHC A:BCL372 3.5 19.1 1.0 CHD A:BCL372 3.5 7.5 1.0 C12 A:BCL370 3.9 16.3 1.0 O A:HOH385 3.9 17.2 1.0 O A:HOH466 4.0 33.0 1.0 C3D A:BCL372 4.2 10.4 1.0 C2B A:BCL372 4.2 22.1 1.0 C3B A:BCL372 4.2 16.1 1.0 C2D A:BCL372 4.3 18.3 1.0 CG2 A:VAL74 4.3 10.4 1.0 C3C A:BCL372 4.4 4.3 1.0 C3A A:BCL372 4.4 10.8 1.0 C2C A:BCL372 4.5 17.3 1.0 C2A A:BCL372 4.5 10.1 1.0 C10 A:BCL370 4.6 15.7 1.0 C11 A:BCL370 4.7 16.7 1.0 OD1 A:ASN79 4.7 27.3 1.0 C15 A:BCL370 4.8 20.7 1.0 C14 A:BCL370 4.8 20.7 1.0 C13 A:BCL370 4.8 20.0 1.0 CB A:VAL74 4.9 24.9 1.0 CBD A:BCL372 5.0 9.0 1.0 CG1 A:VAL74 5.0 13.2 1.0

Magnesium binding site 7 out of 7 in the Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Fmo Protein From Prosthecochloris Aestuarii 2K at Room Temperature within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg373 b:14.5 occ:1.00 MG A:BCL373 0.0 14.5 1.0 NB A:BCL373 2.0 19.4 1.0 O A:LEU242 2.0 16.0 1.0 ND A:BCL373 2.0 12.6 1.0 NC A:BCL373 2.1 16.7 1.0 NA A:BCL373 2.1 13.1 1.0 C4D A:BCL373 3.0 18.9 1.0 C1B A:BCL373 3.0 26.6 1.0 C4B A:BCL373 3.0 18.0 1.0 C4A A:BCL373 3.0 15.6 1.0 C1C A:BCL373 3.1 15.9 1.0 C1D A:BCL373 3.1 14.6 1.0 C4C A:BCL373 3.1 18.3 1.0 C1A A:BCL373 3.2 16.1 1.0 C A:LEU242 3.2 9.9 1.0 CHB A:BCL373 3.4 15.1 1.0 CHC A:BCL373 3.4 26.5 1.0 CHA A:BCL373 3.5 18.4 1.0 CHD A:BCL373 3.5 8.4 1.0 CA A:LEU242 3.9 9.9 1.0 CB A:LEU242 3.9 12.8 1.0 C12 A:BCL368 4.2 24.8 1.0 C3D A:BCL373 4.2 15.1 1.0 C2B A:BCL373 4.2 30.2 1.0 C3B A:BCL373 4.3 15.7 1.0 C2D A:BCL373 4.3 14.6 1.0 CD1 A:LEU242 4.3 13.0 1.0 N A:PHE243 4.3 20.6 1.0 C2C A:BCL373 4.4 16.9 1.0 C3A A:BCL373 4.4 9.8 1.0 C3C A:BCL373 4.4 20.3 1.0 C2A A:BCL373 4.5 9.7 1.0 C15 A:BCL368 4.5 54.0 1.0 CA A:PHE243 4.6 18.2 1.0 CD A:PRO244 4.7 28.8 1.0 C16 A:BCL368 4.8 21.5 1.0 CG A:LEU242 4.8 24.3 1.0 CMA A:BCL373 4.9 15.4 1.0 CBD A:BCL373 4.9 10.5 1.0 C13 A:BCL368 4.9 22.0 1.0

D.E.Tronrud, B.W.Matthews. Refinement of the Structure of A Water-Soluble Antenna Complex From Green Photosynthetic Bacteria By Incorporation of the Chemically Determined Amino Acid Sequence Photosynthetic Reaction V. 1 13 1993CENTER.
ISSN: ISSN 0-12-208661-9