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Magnesium in PDB 4bhq: Structure of the Periplasmic Domain of the Piln Type IV Pilus Biogenesis Protein From Thermus Thermophilus

Protein crystallography data

The structure of Structure of the Periplasmic Domain of the Piln Type IV Pilus Biogenesis Protein From Thermus Thermophilus, PDB code: 4bhq was solved by V.Karuppiah, R.F.Collins, Y.Gao, A.Thistlethwaite, J.P.Derrick, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.96 / 2.05
Space group I 41
Cell size a, b, c (Å), α, β, γ (°) 67.830, 67.830, 147.240, 90.00, 90.00, 90.00
R / Rfree (%) 19.584 / 22.623

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of the Periplasmic Domain of the Piln Type IV Pilus Biogenesis Protein From Thermus Thermophilus (pdb code 4bhq). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of the Periplasmic Domain of the Piln Type IV Pilus Biogenesis Protein From Thermus Thermophilus, PDB code: 4bhq:

Magnesium binding site 1 out of 1 in 4bhq

Go back to Magnesium Binding Sites List in 4bhq
Magnesium binding site 1 out of 1 in the Structure of the Periplasmic Domain of the Piln Type IV Pilus Biogenesis Protein From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Periplasmic Domain of the Piln Type IV Pilus Biogenesis Protein From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1203

b:39.6
occ:1.00
O A:GLY154 3.0 18.2 1.0
O A:HOH2044 3.3 31.1 1.0
CB A:THR192 3.6 19.4 1.0
CG2 A:THR192 3.7 16.1 1.0
C A:GLY154 3.8 20.1 1.0
N A:GLY154 3.9 18.0 1.0
CA A:GLY154 4.2 19.0 1.0
CA A:THR192 4.2 19.0 1.0
CG A:ARG120 4.4 25.6 1.0
O A:PHE193 4.4 20.9 1.0
N A:PHE193 4.4 17.7 1.0
C A:GLN153 4.5 22.0 1.0
CB A:GLN153 4.5 21.2 1.0
CG A:GLU155 4.5 30.0 1.0
OE1 A:GLN153 4.5 34.2 1.0
CB A:ARG120 4.7 20.5 1.0
OG1 A:THR192 4.8 21.4 1.0
N A:GLU155 4.8 22.5 1.0
C A:THR192 4.8 21.3 1.0
CA A:GLN153 4.8 18.2 1.0

Reference:

V.Karuppiah, R.F.Collins, A.Thistlethwaite, Y.Gao, J.P.Derrick. Structure and Assembly of An Inner Membrane Platform For Initiation of Type IV Pilus Biogenesis Proc.Natl.Acad.Sci.Usa V. 110 E4638 2013.
ISSN: ISSN 0027-8424
PubMed: 24218553
DOI: 10.1073/PNAS.1312313110
Page generated: Mon Dec 14 09:12:00 2020

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