Magnesium in PDB 4c2x: Human N-Myristoyltransferase Isoform 2 (NMT2)

All present enzymatic activity of Human N-Myristoyltransferase Isoform 2 (NMT2):
2.3.1.97;

The structure of Human N-Myristoyltransferase Isoform 2 (NMT2), PDB code: 4c2x was solved by E.Thinon, R.A.Serwa, J.A.Brannigan, U.Brassat, M.H.Wright, W.P.Heal, A.J.Wilkinson, D.J.Mann, E.W.Tate, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	61.17 / 2.33
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	49.700, 72.320, 114.690, 90.00, 90.00, 90.00
R / Rfree (%)	21.823 / 28.812

The binding sites of Magnesium atom in the Human N-Myristoyltransferase Isoform 2 (NMT2) (pdb code 4c2x). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human N-Myristoyltransferase Isoform 2 (NMT2), PDB code: 4c2x:

Magnesium binding site 1 out of 1 in the Human N-Myristoyltransferase Isoform 2 (NMT2)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human N-Myristoyltransferase Isoform 2 (NMT2) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg999 b:65.9 occ:1.00 O2A A:NHW1000 2.7 52.9 1.0 O A:LEU254 2.7 33.5 1.0 O4A A:NHW1000 2.8 49.0 1.0 N A:LYS257 2.8 45.9 1.0 N A:SER256 3.2 41.5 1.0 N A:VAL259 3.2 45.2 1.0 N A:ARG258 3.4 46.1 1.0 CA A:LYS257 3.6 40.5 1.0 C A:LYS257 3.6 47.7 1.0 C A:ARG255 3.6 44.5 1.0 P1A A:NHW1000 3.7 47.2 1.0 CB A:VAL259 3.7 43.7 1.0 CB A:LYS257 3.7 42.2 1.0 C A:LEU254 3.8 40.6 1.0 CG2 A:VAL259 3.8 37.8 1.0 O1A A:NHW1000 3.8 50.6 1.0 C A:SER256 3.8 49.0 1.0 CA A:SER256 3.9 47.5 1.0 CA A:ARG255 3.9 41.1 1.0 CA A:VAL259 4.0 45.9 1.0 P2A A:NHW1000 4.0 46.8 1.0 CG1 A:VAL250 4.1 41.8 1.0 CG A:LYS257 4.1 42.6 1.0 C A:ARG258 4.2 43.3 1.0 CA A:ARG258 4.2 47.0 1.0 N A:ARG255 4.3 46.0 1.0 O3A A:NHW1000 4.3 40.1 1.0 O A:LYS257 4.3 58.5 1.0 O A:ARG255 4.4 43.3 1.0 N A:ALA260 4.5 47.7 1.0 O6A A:NHW1000 4.7 50.6 1.0 C A:VAL259 4.8 48.1 1.0 CB A:VAL250 5.0 38.0 1.0 CG2 A:VAL250 5.0 30.6 1.0 O A:SER256 5.0 57.6 1.0

E.Thinon, R.A.Serwa, M.Broncel, J.A.Brannigan, U.Brassat, M.H.Wright, W.P.Heal, A.J.Wilkinson, D.J.Mann, E.W.Tate. Global Profiling of Co- and Post-Translationally N-Myristoylated Proteomes in Human Cells. Nat.Commun. V. 5 4919 2014.
ISSN: ISSN 2041-1723
PubMed: 25255805
DOI: 10.1038/NCOMMS5919