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Magnesium in PDB 4c8g: Ispf (Burkholderia Cenocepacia) Cmp Complex

Enzymatic activity of Ispf (Burkholderia Cenocepacia) Cmp Complex

All present enzymatic activity of Ispf (Burkholderia Cenocepacia) Cmp Complex:
4.6.1.12;

Protein crystallography data

The structure of Ispf (Burkholderia Cenocepacia) Cmp Complex, PDB code: 4c8g was solved by P.E.F.O'rourke, J.Kalinowska-Tluscik, P.K.Fyfe, A.Dawson, W.N.Hunter, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.65 / 2.00
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 97.230, 88.552, 72.392, 90.00, 103.87, 90.00
R / Rfree (%) 23.664 / 27.917

Other elements in 4c8g:

The structure of Ispf (Burkholderia Cenocepacia) Cmp Complex also contains other interesting chemical elements:

Zinc (Zn) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ispf (Burkholderia Cenocepacia) Cmp Complex (pdb code 4c8g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ispf (Burkholderia Cenocepacia) Cmp Complex, PDB code: 4c8g:

Magnesium binding site 1 out of 1 in 4c8g

Go back to Magnesium Binding Sites List in 4c8g
Magnesium binding site 1 out of 1 in the Ispf (Burkholderia Cenocepacia) Cmp Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ispf (Burkholderia Cenocepacia) Cmp Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg1165

b:15.3
occ:1.00
O B:HOH2056 2.0 13.7 1.0
O C:HOH2036 2.1 23.0 1.0
O B:HOH2057 2.2 24.6 1.0
O C:HOH2035 2.3 19.2 1.0
O A:HOH2068 2.4 11.5 1.0
O A:HOH2067 2.5 14.8 1.0
O B:HOH2009 3.3 9.4 0.5
O C:HOH2004 3.3 18.5 1.0
O A:HOH2071 3.9 6.6 0.5
OE1 B:GLU149 4.0 7.8 1.0
O B:HOH2058 4.1 12.0 1.0
OE2 A:GLU149 4.2 6.6 1.0
OE1 A:GLU149 4.2 7.5 1.0
OE1 C:GLU149 4.3 8.6 1.0
OE2 B:GLU149 4.3 8.0 1.0
O C:HOH2034 4.4 8.2 1.0
O A:HOH2065 4.4 10.1 1.0
O B:HOH2053 4.4 12.4 1.0
O A:HOH2069 4.5 22.1 1.0
OE2 C:GLU149 4.5 7.7 1.0
O B:HOH2063 4.6 14.1 1.0
CD B:GLU149 4.6 7.3 1.0
CD A:GLU149 4.6 7.2 1.0
O B:HOH2059 4.7 14.0 1.0
CD C:GLU149 4.9 7.7 1.0

Reference:

P.E.F.O'rourke, J.Kalinowska-Tluscik, P.K.Fyfe, A.Dawson, W.N.Hunter. Crystal Structures of Ispf From Plasmodium Falciparum and Burkholderia Cenocepacia: Comparisons Inform Antimicrobial Drug Target Assessment. Bmc Struct.Biol. V. 14 1 2014.
ISSN: ISSN 1472-6807
PubMed: 24410837
DOI: 10.1186/1472-6807-14-1
Page generated: Mon Dec 14 09:16:39 2020

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