Atomistry » Magnesium » PDB 4cgl-4cs4 » 4cgy
Atomistry »
  Magnesium »
    PDB 4cgl-4cs4 »
      4cgy »

Magnesium in PDB 4cgy: Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex

Enzymatic activity of Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex

All present enzymatic activity of Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex:
5.99.1.2;

Protein crystallography data

The structure of Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex, PDB code: 4cgy was solved by N.Bocquet, R.D.Bunker, N.H.Thoma, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 65.49 / 2.85
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 94.010, 94.010, 381.690, 90.00, 90.00, 90.00
R / Rfree (%) 19.73 / 23.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex (pdb code 4cgy). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex, PDB code: 4cgy:

Magnesium binding site 1 out of 1 in 4cgy

Go back to Magnesium Binding Sites List in 4cgy
Magnesium binding site 1 out of 1 in the Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of the Human Topoisomerase III Alpha-RMI1 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1640

b:62.3
occ:1.00
O A:HOH2005 2.1 63.9 1.0
O A:HOH2006 2.1 63.1 1.0
O A:HOH2010 2.1 64.5 1.0
O A:HOH2003 2.1 62.6 1.0
O A:HOH2004 2.1 61.6 1.0
OE2 A:GLU41 2.1 83.4 1.0
CD A:GLU41 3.2 90.7 1.0
OE1 A:GLU41 3.6 88.4 1.0
OD2 A:ASP148 4.1 90.8 1.0
OD2 A:ASP150 4.3 64.3 1.0
OH A:TYR362 4.3 70.3 1.0
OE2 A:GLU352 4.3 94.9 1.0
CG A:GLU41 4.4 73.1 1.0
OD1 A:ASP150 4.5 67.5 1.0
OE1 A:GLU352 4.6 84.9 1.0
CB A:GLU152 4.8 59.1 1.0
CG A:ASP150 4.8 65.1 1.0
CD A:GLU352 4.8 0.2 1.0
CB A:ASP148 4.8 60.5 1.0
CD1 A:ILE156 4.9 51.1 1.0
CG A:ASP148 4.9 79.8 1.0

Reference:

N.Bocquet, A.H.Bizard, W.Abdulrahman, N.B.Larsen, M.Faty, S.Cavadini, R.D.Bunker, S.C.Kowalczykowski, P.Cejka, I.D.Hickson, N.H.Thoma. Structural and Mechanistic Insight Into Holliday-Junction Dissolution By Topoisomerase Iiialpha and RMI1 Nat.Struct.Mol.Biol. V. 21 261 2014.
ISSN: ISSN 1545-9993
PubMed: 24509834
DOI: 10.1038/NSMB.2775
Page generated: Thu Aug 15 16:48:31 2024

Last articles

Cl in 3MOG
Cl in 3MOZ
Cl in 3MOR
Cl in 3MNV
Cl in 3MMZ
Cl in 3MNA
Cl in 3MNF
Cl in 3MMX
Cl in 3MMK
Cl in 3MML
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy