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Magnesium in PDB 4ck6: Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment.

Other elements in 4ck6:

The structure of Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment. also contains other interesting chemical elements:

Fluorine (F) 3 atoms
Aluminium (Al) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment. (pdb code 4ck6). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment., PDB code: 4ck6:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 4ck6

Go back to Magnesium Binding Sites List in 4ck6
Magnesium binding site 1 out of 2 in the Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1208

b:18.6
occ:1.00
O1G A:GTP1209 2.4 28.7 1.0
O1B A:GTP1209 3.2 41.2 1.0
PG A:GTP1209 3.7 30.0 1.0
O3B A:GTP1209 3.7 35.2 1.0
PB A:GTP1209 3.8 41.4 1.0
O3A A:GTP1209 4.1 39.2 1.0
O2A A:GTP1209 4.4 44.5 1.0
O2G A:GTP1209 4.5 35.0 1.0
CA A:GLN11 4.7 23.8 1.0
PA A:GTP1209 4.8 41.3 1.0
O3G A:GTP1209 4.9 32.1 1.0

Magnesium binding site 2 out of 2 in 4ck6

Go back to Magnesium Binding Sites List in 4ck6
Magnesium binding site 2 out of 2 in the Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Pseudo-Atomic Model of Microtubule-Bound Human Kinesin-5 Motor Domain in the Adp.Alfx State, Based on Cryo-Electron Microscopy Experiment. within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg1205

b:54.4
occ:1.00
F1 C:AF31206 2.1 81.8 1.0
AL C:AF31206 2.7 76.3 1.0
O3B C:ADP1207 2.7 42.8 1.0
F3 C:AF31206 3.0 62.0 1.0
O2A C:ADP1207 3.5 51.4 1.0
PB C:ADP1207 3.7 44.1 1.0
O2B C:ADP1207 4.0 57.9 1.0
O1A C:ADP1207 4.1 58.4 1.0
PA C:ADP1207 4.2 52.7 1.0
F2 C:AF31206 4.2 65.7 1.0
O3A C:ADP1207 4.3 50.1 1.0
CA C:SER232 4.5 13.4 1.0

Reference:

A.Goulet, J.Major, Y.Jun, S.P.Gross, S.S.Rosenfeld, C.A.Moores. Comprehensive Structural Model of the Mechanochemical Cycle of A Mitotic Motor Highlights Molecular Adaptations in the Kinesin Family. Proc.Natl.Acad.Sci.Usa V. 111 1837 2014.
ISSN: ISSN 0027-8424
PubMed: 24449904
DOI: 10.1073/PNAS.1319848111
Page generated: Mon Dec 14 11:41:16 2020

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