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Magnesium in PDB 4clt: Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate

Enzymatic activity of Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate

All present enzymatic activity of Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate:
4.6.1.1;

Protein crystallography data

The structure of Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate, PDB code: 4clt was solved by S.Kleinboelting, M.Weyand, C.Steegborn, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 87.44 / 1.95
Space group P 63
Cell size a, b, c (Å), α, β, γ (°) 100.970, 100.970, 97.210, 90.00, 90.00, 120.00
R / Rfree (%) 17.341 / 22.015

Other elements in 4clt:

The structure of Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate (pdb code 4clt). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate, PDB code: 4clt:

Magnesium binding site 1 out of 1 in 4clt

Go back to Magnesium Binding Sites List in 4clt
Magnesium binding site 1 out of 1 in the Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Human Soluble Adenylyl Cyclase with Adenosine-3',5'-Cyclic-Monophosphate and Pyrophosphate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1471

b:40.4
occ:1.00
 O4 A:POP1474 2.1 57.4 1.0
OD1 A:ASP99 2.2 32.3 1.0
OD1 A:ASP47 2.4 35.0 1.0
O3 A:POP1474 2.6 48.3 1.0
CG A:ASP99 3.2 35.6 1.0
P2 A:POP1474 3.4 64.4 1.0
CG A:ASP47 3.4 38.4 1.0
O A:POP1474 3.5 57.9 1.0
OD2 A:ASP99 3.6 51.4 1.0
P1 A:POP1474 3.6 56.5 1.0
O A:ILE48 3.7 41.7 1.0
OD2 A:ASP47 3.7 40.9 1.0
O1 A:POP1474 4.3 54.5 1.0
O6 A:POP1474 4.4 55.1 1.0
O5 A:POP1474 4.5 59.8 1.0
CB A:ASP99 4.6 32.1 1.0
C A:ILE48 4.6 37.0 1.0
C A:ASP99 4.7 23.9 1.0
CB A:ALA100 4.8 21.5 1.0
N A:ASP99 4.8 23.2 1.0
CB A:ASP47 4.8 30.8 1.0
O2 A:POP1474 4.8 62.4 1.0
CG2 A:THR52 4.9 38.9 1.0
O A:ASP99 4.9 23.4 1.0
CA A:ASP99 4.9 25.5 1.0
N A:ALA100 4.9 23.0 1.0

Reference:

S.Kleinboelting, A.Diaz, S.Moniot, J.Van Den Heuvel, M.Weyand, L.R.Levin, J.Buck, C.Steegborn. Crystal Structures of Human Soluble Adenylyl Cyclase Reveal Mechanisms of Catalysis and of Its Activation Through Bicarbonate. Proc.Natl.Acad.Sci.Usa V. 111 3727 2014.
ISSN: ISSN 0027-8424
PubMed: 24567411
DOI: 10.1073/PNAS.132277811
Page generated: Mon Dec 14 11:41:21 2020

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