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Magnesium in PDB 4d0g: Structure of RAB14 in Complex with Rab-Coupling Protein (Rcp)

Protein crystallography data

The structure of Structure of RAB14 in Complex with Rab-Coupling Protein (Rcp), PDB code: 4d0g was solved by P.Lall, A.R.Khan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 80.50 / 2.50
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 95.870, 148.228, 38.808, 90.00, 90.00, 90.00
R / Rfree (%) 22.403 / 29.438

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of RAB14 in Complex with Rab-Coupling Protein (Rcp) (pdb code 4d0g). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of RAB14 in Complex with Rab-Coupling Protein (Rcp), PDB code: 4d0g:

Magnesium binding site 1 out of 1 in 4d0g

Go back to Magnesium Binding Sites List in 4d0g
Magnesium binding site 1 out of 1 in the Structure of RAB14 in Complex with Rab-Coupling Protein (Rcp)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of RAB14 in Complex with Rab-Coupling Protein (Rcp) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1175

b:41.0
occ:1.00
OG A:SER25 1.9 49.9 1.0
O2B A:GTP900 1.9 43.5 1.0
O3G A:GTP900 2.0 47.5 1.0
O A:HOH2005 2.1 42.0 1.0
O A:HOH2006 2.3 41.5 1.0
OG1 A:THR43 2.4 46.2 1.0
PB A:GTP900 3.1 42.4 1.0
PG A:GTP900 3.1 45.6 1.0
CB A:SER25 3.1 48.5 1.0
O3B A:GTP900 3.2 44.1 1.0
CB A:THR43 3.4 49.8 1.0
N A:SER25 3.7 43.1 1.0
OD2 A:ASP66 3.8 54.0 1.0
O2G A:GTP900 3.8 42.4 1.0
N A:THR43 3.9 55.3 1.0
CA A:SER25 4.0 46.7 1.0
O2A A:GTP900 4.0 51.5 1.0
O1B A:GTP900 4.1 38.2 1.0
O3A A:GTP900 4.3 45.4 1.0
CA A:THR43 4.3 51.7 1.0
O1G A:GTP900 4.3 46.0 1.0
OD1 A:ASP66 4.4 49.0 1.0
PA A:GTP900 4.5 51.9 1.0
CG A:ASP66 4.5 48.8 1.0
CG2 A:THR43 4.5 48.2 1.0
O1A A:GTP900 4.6 52.1 1.0
CA A:HIS42 4.7 68.3 1.0
CB A:LYS24 4.7 39.0 1.0
C A:HIS42 4.7 62.4 1.0
O A:THR67 4.8 48.0 1.0
C A:LYS24 4.8 41.6 1.0

Reference:

P.Lall, A.Lindsay, S.Hanscom, T.Kecman, E.Franklin, M.W.Mccaffrey, A.R.Khan. Structural Basis For RAB14 Interactions with RAB11- Family Interacting Proteins To Be Published.
Page generated: Thu Aug 15 16:58:15 2024

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