Magnesium in PDB 4dca: Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound

The structure of Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound, PDB code: 4dca was solved by P.J.Stogios, G.Minasov, A.U.Singer, K.Tan, B.Nocek, E.Evdokimova, O.Egorova, R.Di Leo, A.Savchenko, W.F.Anderson, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.38 / 1.80
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	64.938, 88.465, 62.299, 90.00, 90.00, 90.00
R / Rfree (%)	19.5 / 22.5

The binding sites of Magnesium atom in the Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound (pdb code 4dca). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound, PDB code: 4dca:

Magnesium binding site 1 out of 1 in the Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:74.8 occ:1.00 OD1 A:ASN197 2.9 33.8 1.0 O A:HOH838 3.0 60.1 1.0 O1B A:ADP401 3.0 72.2 1.0 OD2 A:ASP210 3.2 48.7 1.0 ND2 A:ASN197 3.3 33.9 1.0 CG A:ASN197 3.4 31.5 1.0 O A:HOH837 3.4 66.2 1.0 OD2 A:ASP192 3.8 39.9 1.0 O1A A:ADP401 3.8 62.0 1.0 CB A:ASN196 4.1 42.5 1.0 CG A:ASP210 4.4 46.2 1.0 PB A:ADP401 4.5 75.2 1.0 ND2 A:ASN196 4.5 45.3 1.0 O A:ASN196 4.8 34.8 1.0 CB A:ASN197 4.8 28.8 1.0 CG A:ASP192 4.8 38.4 1.0 CG A:ASN196 4.8 47.2 1.0 C A:ASN196 4.9 33.1 1.0 CB A:ASP210 4.9 38.0 1.0

P.J.Stogios, G.Minasov, A.U.Singer, K.Tan, B.Nocek, E.Evdokimova, O.Egorova, R.Di Leo, A.Savchenko, W.F.Anderson, Center For Structural Genomics Of Infectious Diseases(Csgid). Crystal Structure of Aminoglycoside Phosphotransferase Aph(2'')-Ib, Adp-Bound To Be Published.