Magnesium in PDB 4dzh: Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn

The structure of Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn, PDB code: 4dzh was solved by M.W.Vetting, R.Toro, R.Bhosle, S.R.Wasserman, L.L.Morisco, S.Sojitra, S.Chamala, A.Kar, J.Lafleur, G.Villigas, B.Evans, J.Hammonds, A.Gizzi, W.D.Zencheck, B.Hillerich, J.Love, R.D.Seidel, J.B.Bonanno, F.M.Raushel, S.C.Almo, New York Structural Genomics Research Consortium (Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	17.97 / 1.55
Space group	C 1 2 1
Cell size a, b, c (Å), α, β, γ (°)	133.645, 53.150, 67.390, 90.00, 106.54, 90.00
R / Rfree (%)	20.8 / 23.3

The structure of Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn also contains other interesting chemical elements:

Zinc

(Zn)

3 atoms

The binding sites of Magnesium atom in the Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn (pdb code 4dzh). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn, PDB code: 4dzh:

Magnesium binding site 1 out of 1 in the Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:12.9 occ:1.00 OD1 A:ASN320 2.0 14.5 1.0 OE1 A:GLU288 2.0 13.9 1.0 O A:HOH843 2.0 13.3 1.0 OD1 A:ASP322 2.1 15.4 1.0 O A:HOH840 2.1 14.7 1.0 O A:HOH842 2.2 16.4 1.0 CG A:ASP322 3.0 17.1 1.0 CG A:ASN320 3.1 10.8 1.0 CD A:GLU288 3.2 19.5 1.0 OD2 A:ASP322 3.4 17.9 1.0 ND2 A:ASN320 3.6 13.3 1.0 OE2 A:GLU288 3.8 17.4 1.0 O A:ASN320 4.1 15.1 1.0 OE2 A:GLU328 4.1 15.4 1.0 N A:ASP322 4.2 16.1 1.0 OG A:SER327 4.2 13.8 1.0 O A:ASP322 4.2 14.1 1.0 O A:HOH617 4.3 18.1 1.0 C A:ASN320 4.3 15.1 1.0 CB A:ASP322 4.3 13.5 1.0 CG A:GLU288 4.4 16.8 1.0 CB A:ASN320 4.4 13.9 1.0 CB A:GLU288 4.5 16.5 1.0 CB A:SER327 4.5 15.7 1.0 C A:ASP322 4.5 14.8 1.0 CA A:ASP322 4.5 11.9 1.0 O A:ASP324 4.6 13.2 1.0 CB A:ASP324 4.6 10.3 1.0 N A:ASN321 4.6 14.8 1.0 N A:ASP324 4.8 11.9 1.0 CA A:ASN320 4.8 13.1 1.0

M.W.Vetting, R.Toro, R.Bhosle, S.R.Wasserman, L.L.Morisco, S.Sojitra, S.Chamala, A.Kar, J.Lafleur, G.Villigas, B.Evans, J.Hammonds, A.Gizzi, W.D.Zencheck, B.Hillerich, J.Love, R.D.Seidel, J.B.Bonanno, F.M.Raushel, S.C.Almo, New York Structural Genomics Research Consortium (Nysgrc). Crystal Structure of An Adenosine Deaminase From Xanthomonas Campestris (Target Nysgrc-200456) with Bound Zn To Be Published.