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Magnesium in PDB 4e6e: Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.)

Protein crystallography data

The structure of Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.), PDB code: 4e6e was solved by Joint Center For Structural Genomics (Jcsg), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 28.23 / 2.12
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 80.573, 80.573, 92.454, 90.00, 90.00, 120.00
R / Rfree (%) 19.5 / 23.1

Other elements in 4e6e:

The structure of Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.) also contains other interesting chemical elements:

Chlorine (Cl) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.) (pdb code 4e6e). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.), PDB code: 4e6e:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in 4e6e

Go back to Magnesium Binding Sites List in 4e6e
Magnesium binding site 1 out of 4 in the Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg601

b:68.4
occ:1.00
O A:ILE198 2.1 56.9 1.0
O A:HOH793 2.3 59.3 1.0
O A:HOH794 2.6 51.7 1.0
O A:HOH795 2.7 59.9 1.0
O A:THR195 3.2 44.6 1.0
C A:ILE198 3.2 58.8 1.0
N A:ILE198 3.7 50.7 1.0
CA A:ILE198 3.8 51.6 1.0
O A:HOH796 3.8 76.5 1.0
CB A:ILE198 4.0 53.5 1.0
O A:ASP196 4.0 50.0 1.0
O A:HOH824 4.2 68.2 1.0
C A:ASP196 4.3 49.6 1.0
CB A:THR200 4.3 79.6 1.0
C A:THR195 4.3 45.4 1.0
N A:THR199 4.4 59.4 1.0
C A:LEU197 4.4 53.8 1.0
CG2 A:ILE198 4.6 54.2 1.0
C A:THR199 4.6 69.6 1.0
CA A:ASP196 4.6 45.6 1.0
N A:THR200 4.7 69.8 1.0
CG2 A:THR200 4.8 78.2 1.0
N A:LEU197 4.8 46.2 1.0
O A:THR199 4.8 68.1 1.0
O A:HOH741 4.9 47.7 1.0
CA A:THR199 4.9 61.5 1.0
N A:ASP196 5.0 44.4 1.0

Magnesium binding site 2 out of 4 in 4e6e

Go back to Magnesium Binding Sites List in 4e6e
Magnesium binding site 2 out of 4 in the Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg602

b:32.5
occ:0.50
O A:HOH710 2.0 30.7 1.0
O A:HOH711 2.0 31.3 0.5
O A:HOH784 2.1 40.1 0.5
OD2 A:ASP51 2.2 37.5 1.0
CG A:ASP51 3.1 38.4 1.0
OD1 A:ASP51 3.3 39.5 1.0
ND2 A:ASN25 4.0 33.2 1.0
O A:MSE49 4.0 32.8 1.0
O A:HOH764 4.2 55.2 1.0
CB A:ASP51 4.5 32.4 1.0
OE2 A:GLU29 4.9 83.9 1.0
O A:HOH737 4.9 44.1 1.0

Magnesium binding site 3 out of 4 in 4e6e

Go back to Magnesium Binding Sites List in 4e6e
Magnesium binding site 3 out of 4 in the Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg603

b:77.3
occ:1.00
O A:HOH833 2.2 70.3 1.0
O A:HOH740 2.4 47.7 1.0
O A:HOH822 2.5 60.8 1.0
O A:HOH830 2.7 64.8 1.0
O A:HOH828 2.7 62.3 1.0
O A:HOH724 3.5 41.1 1.0
O A:HOH761 4.2 54.4 1.0
O A:VAL35 4.3 42.7 1.0
OD1 A:ASP53 4.4 54.4 1.0
OD2 A:ASP53 4.6 42.5 1.0
CE2 A:PHE37 4.6 36.1 1.0
CD2 A:PHE37 4.8 32.7 1.0
O A:HOH728 4.8 43.6 1.0
CL A:CL605 4.9 86.9 1.0
CG A:ASP53 5.0 49.8 1.0

Magnesium binding site 4 out of 4 in 4e6e

Go back to Magnesium Binding Sites List in 4e6e
Magnesium binding site 4 out of 4 in the Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Crystal Structure of A Putative Cell Division Protein Ftsz (TFU_1113) From Thermobifida Fusca Yx-ER1 at 2.22 A Resolution (Psi Community Target, Van Wezel G.P.) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg604

b:69.0
occ:1.00
O A:HOH829 2.3 73.1 1.0
O A:HOH838 2.3 88.9 1.0
O A:HOH745 2.4 47.8 1.0
O A:HOH834 2.4 73.5 1.0
O A:HOH839 2.6 68.3 1.0
NE2 A:HIS82 2.8 46.7 1.0
CE1 A:HIS82 3.6 46.0 1.0
CD2 A:HIS82 3.8 46.2 1.0
O A:GLY59 3.8 55.2 1.0
O A:HOH797 4.2 58.9 1.0
O A:HOH799 4.2 61.6 1.0
O A:HOH798 4.5 64.1 1.0
O A:ASP57 4.5 41.7 1.0
O A:HOH774 4.7 59.6 1.0
ND1 A:HIS82 4.8 46.0 1.0
CG A:HIS82 4.9 44.0 1.0

Reference:

Joint Center For Structural Genomics (Jcsg), Joint Center For Structural Genomics (Jcsg). N/A N/A.
Page generated: Fri Aug 16 13:36:10 2024

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