Magnesium in PDB 4fce: Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1)

All present enzymatic activity of Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1):
2.3.1.157; 2.7.7.23;

The structure of Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1), PDB code: 4fce was solved by B.Nocek, M.Kuhn, M.Gu, W.F.Anderson, A.Joachimiak, Center For Structuralgenomics Of Infectious Diseases (Csgid), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	32.47 / 1.96
Space group	P 63 2 2
Cell size a, b, c (Å), α, β, γ (°)	87.571, 87.571, 251.368, 90.00, 90.00, 120.00
R / Rfree (%)	18.5 / 21.6

The binding sites of Magnesium atom in the Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1) (pdb code 4fce). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1), PDB code: 4fce:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg501 b:24.8 occ:0.41 OD1 A:ASP406 2.1 17.2 1.0 O A:HOH658 2.1 8.4 0.8 CG A:ASP406 3.0 18.8 1.0 OD2 A:ASP406 3.3 19.7 1.0 MG A:MG502 4.0 30.6 0.5 O A:HOH647 4.2 18.4 1.0 CB A:ASP406 4.4 18.0 1.0 O A:HOH623 4.4 23.6 1.0 O A:GLY381 4.5 16.0 1.0 CA A:ASP406 4.8 16.9 1.0

Magnesium binding site 2 out of 2 in the Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D- Glucosamine 1-Phosphate (GP1) within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:30.6 occ:0.51 O A:HOH948 2.0 16.9 1.0 OD2 A:ASP406 2.2 19.7 1.0 CG A:ASP406 3.1 18.8 1.0 OD1 A:ASP406 3.6 17.2 1.0 NE2 A:GLN408 3.9 20.2 1.0 MG A:MG501 4.0 24.8 0.4 O A:HOH904 4.0 42.8 1.0 O A:ASP406 4.0 18.7 1.0 CB A:ASP406 4.3 18.0 1.0 O A:HOH647 4.9 18.4 1.0 C A:ASP406 5.0 17.3 1.0

B.Nocek, M.Kuhn, W.F.Anderson, A.Joachimiak. Crystal Structure of Yersinia Pestis Glmu in Complex with Alpha-D-Glucosamine 1-Phosphate (GP1) To Be Published.