Magnesium in PDB 4fo0: Human Actin-Related Protein ARP8 in Its Atp-Bound State

The structure of Human Actin-Related Protein ARP8 in Its Atp-Bound State, PDB code: 4fo0 was solved by C.B.Gerhold, K.Lakomek, F.U.Seifert, K.-P.Hopfner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	44.90 / 2.60
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	80.875, 151.262, 173.350, 90.00, 90.00, 90.00
R / Rfree (%)	16.3 / 21

The structure of Human Actin-Related Protein ARP8 in Its Atp-Bound State also contains other interesting chemical elements:

Chlorine

(Cl)

1 atom

The binding sites of Magnesium atom in the Human Actin-Related Protein ARP8 in Its Atp-Bound State (pdb code 4fo0). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Actin-Related Protein ARP8 in Its Atp-Bound State, PDB code: 4fo0:

Magnesium binding site 1 out of 1 in the Human Actin-Related Protein ARP8 in Its Atp-Bound State


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Actin-Related Protein ARP8 in Its Atp-Bound State within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg701 b:26.2 occ:1.00 O1G A:ATP702 2.1 28.1 1.0 O A:HOH844 2.1 29.2 1.0 O A:HOH905 2.2 41.0 1.0 O2B A:ATP702 2.2 26.0 1.0 O A:HOH907 2.2 43.8 1.0 O A:HOH901 2.5 30.2 1.0 PG A:ATP702 3.3 29.8 1.0 PB A:ATP702 3.4 34.0 1.0 NZ A:LYS288 3.6 32.1 1.0 O3B A:ATP702 3.7 29.9 1.0 O2G A:ATP702 3.8 28.0 1.0 O A:HOH809 3.8 41.0 1.0 OD2 A:ASP283 4.1 53.4 1.0 O3A A:ATP702 4.1 36.5 1.0 OD1 A:ASP283 4.1 55.9 1.0 O2A A:ATP702 4.2 28.3 1.0 OE2 A:GLU266 4.3 42.9 1.0 CE A:LYS288 4.4 39.3 1.0 NE2 A:HIS52 4.4 45.8 1.0 O A:HOH836 4.4 32.3 1.0 CA A:GLY54 4.5 33.2 1.0 O A:HOH806 4.5 32.6 1.0 CG A:ASP283 4.5 60.4 1.0 O A:HOH813 4.5 38.0 1.0 O A:PRO53 4.6 31.3 1.0 CE1 A:HIS52 4.6 38.7 1.0 O3G A:ATP702 4.6 27.7 1.0 O1B A:ATP702 4.7 24.5 1.0 CA A:GLY285 4.7 31.2 1.0 PA A:ATP702 4.7 33.6 1.0 NH2 A:ARG59 5.0 47.2 1.0

C.B.Gerhold, D.D.Winkler, K.Lakomek, F.U.Seifert, S.Fenn, B.Kessler, G.Witte, K.Luger, K.P.Hopfner. Structure of Actin-Related Protein 8 and Its Contribution to Nucleosome Binding. Nucleic Acids Res. V. 40 11036 2012.
ISSN: ISSN 0305-1048
PubMed: 22977180
DOI: 10.1093/NAR/GKS842