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Magnesium in PDB 4h0l: Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno

Enzymatic activity of Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno

All present enzymatic activity of Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno:
1.10.9.1;

Protein crystallography data

The structure of Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno, PDB code: 4h0l was solved by S.S.Hasan, E.Yamashita, D.Baniulis, W.A.Cramer, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.45 / 3.25
Space group P 61 2 2
Cell size a, b, c (Å), α, β, γ (°) 159.133, 159.133, 362.250, 90.00, 90.00, 120.00
R / Rfree (%) 21.8 / 24.7

Other elements in 4h0l:

The structure of Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno also contains other interesting chemical elements:

Cadmium (Cd) 2 atoms
Iron (Fe) 6 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno (pdb code 4h0l). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno, PDB code: 4h0l:

Magnesium binding site 1 out of 1 in 4h0l

Go back to Magnesium Binding Sites List in 4h0l
Magnesium binding site 1 out of 1 in the Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cytochrome B6F Complex Crystal Structure From Mastigocladus Laminosus with N-Side Inhibitor Nqno within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg202

b:77.6
occ:1.00
 MG B:CLA202 0.0 77.6 1.0
NB B:CLA202 2.0 79.4 1.0
ND B:CLA202 2.0 78.8 1.0
NC B:CLA202 2.1 75.2 1.0
NA B:CLA202 2.1 68.4 1.0
O B:HOH301 2.1 68.8 1.0
C4D B:CLA202 2.9 80.4 1.0
C1B B:CLA202 3.0 80.1 1.0
C4A B:CLA202 3.1 67.9 1.0
C1C B:CLA202 3.1 75.3 1.0
C4B B:CLA202 3.1 80.1 1.0
C4C B:CLA202 3.1 79.1 1.0
C1A B:CLA202 3.1 70.2 1.0
C1D B:CLA202 3.2 69.4 1.0
CHB B:CLA202 3.4 70.6 1.0
CHC B:CLA202 3.4 82.9 1.0
CHA B:CLA202 3.5 72.3 1.0
CHD B:CLA202 3.5 70.0 1.0
HG1 B:THR140 3.7 0.7 1.0
HD13 B:LEU108 3.8 0.3 1.0
HD11 B:LEU108 3.8 0.3 1.0
HBR B:OPC203 3.8 84.3 1.0
O B:HOH302 3.9 69.0 1.0
CD1 B:LEU108 4.2 93.6 1.0
C3D B:CLA202 4.3 84.3 1.0
C2B B:CLA202 4.3 81.8 1.0
C2C B:CLA202 4.3 82.7 1.0
C3B B:CLA202 4.3 81.8 1.0
OG1 B:THR140 4.3 98.9 1.0
C3C B:CLA202 4.4 87.6 1.0
HG13 B:VAL104 4.4 85.4 1.0
C2D B:CLA202 4.4 82.6 1.0
C3A B:CLA202 4.4 64.2 1.0
C2A B:CLA202 4.4 71.8 1.0
HD12 B:LEU108 4.6 0.3 1.0
CBR B:OPC203 4.6 70.3 1.0
HA3 B:GLY136 4.7 0.8 1.0
HAA1 B:CLA202 4.9 0.8 1.0
HBT1 B:OPC203 4.9 0.6 1.0
CBD B:CLA202 4.9 72.0 1.0
HBT2 B:OPC203 5.0 0.6 1.0

Reference:

S.S.Hasan, E.Yamashita, D.Baniulis, W.A.Cramer. Quinone-Dependent Proton Transfer Pathways in the Photosynthetic Cytochrome B6F Complex Proc.Natl.Acad.Sci.Usa V. 110 4297 2013.
ISSN: ISSN 0027-8424
PubMed: 23440205
DOI: 10.1073/PNAS.1222248110
Page generated: Mon Dec 14 17:03:21 2020

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