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Magnesium in PDB 4h16: Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422

Protein crystallography data

The structure of Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422, PDB code: 4h16 was solved by A.Ghosh, S.C.Almo, New York Structural Genomics Research Consortium(Nysgrc), with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.29 / 2.00
Space group P 64 2 2
Cell size a, b, c (Å), α, β, γ (°) 129.200, 129.200, 103.500, 90.00, 90.00, 120.00
R / Rfree (%) 16.3 / 17.8

Other elements in 4h16:

The structure of Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422 also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422 (pdb code 4h16). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422, PDB code: 4h16:

Magnesium binding site 1 out of 1 in 4h16

Go back to Magnesium Binding Sites List in 4h16
Magnesium binding site 1 out of 1 in the Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:35.9
occ:1.00
O A:HOH549 2.2 29.4 1.0
O A:HOH447 2.3 24.1 1.0
O A:ALA96 2.4 22.3 1.0
O A:HOH520 2.4 38.6 1.0
OD2 A:ASP101 2.4 18.8 1.0
O A:HOH555 2.5 40.5 1.0
CG A:ASP101 3.4 22.2 1.0
C A:ALA96 3.5 21.8 1.0
OD1 A:ASP101 3.8 25.3 1.0
O A:HOH542 3.9 46.3 1.0
CA A:LEU97 4.0 16.5 1.0
N A:LEU97 4.1 18.3 1.0
N A:SER98 4.2 16.0 1.0
N A:ALA90 4.3 22.3 1.0
CB A:ALA90 4.4 27.8 1.0
CB A:ALA96 4.4 20.8 1.0
CA A:ALA96 4.5 20.8 1.0
C A:LEU97 4.6 18.4 1.0
O A:ALA90 4.6 22.8 1.0
CB A:ASP101 4.6 15.6 1.0
O A:HOH499 4.7 23.7 0.6
O A:HOH567 4.7 34.0 1.0
CA A:ALA90 4.8 24.2 1.0
CD2 A:LEU97 4.9 16.3 1.0
C A:ALA90 5.0 24.4 1.0

Reference:

A.Ghosh, R.Bhoshle, R.Toro, A.Gizzi, B.Hillerich, R.Seidel, S.C.Almo, New York Structural Genomics Research Consortium. Crystal Structure of A Short Chain Alcohol Dehydrogenase-Related Dehydrogenase (Target Id Nysgrc-011812) From Sinorhizobium Meliloti 1021 in Space Group P6422 To Be Published.
Page generated: Mon Dec 14 17:05:02 2020

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